| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3101 |
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| Symbol | |
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| ID | 5455432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3312600 |
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| End bp | 3313883 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878690 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001414365 |
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| Protein GI | 154253541 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.627117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG AAAGCGCCAC CAGAAGCGAC CAAGAAGAGC CCGCTCCGCG TTTTTTCTAC
GGCTGGTACG TCGTGGGTGC AGTGCTGGTC ATCATGACCG TAACCGCAGG ACTCGGTTTT
TATAATCTGT CGGTTTACCT GAAGGCGTTT GTCGTTCAGG GCGGGTTTTC GGTAGCGGCG
ACATCGGGCG CGACGGCCTG TTTCTTCATT GCATCGGGCA TTAGCGGATT GGGTGTTGCC
GCATTGATAG AGCGCTACGA TCCGCGCTGG GTCATCACTG CGGGCGCATT CTTCTCGGCG
TTCGCAACGC TCGGCGCGGG CTATGTCACC GAGCTTTGGC AGCTCTATCT TTTCTATATT
CTCTTTGGCG TCGGCTATGC AGGTGCGGCA CTGATCCCCG GCACCACGCT CGTCGCGCGC
TGGTTCGCGC GCCGCCGTTC GGTCGCGCTC TCCTATGCGT CGACCGGTCT CTCGCTCGGC
GGAATTTTGC TGACGCCCCT CTCCGCATGG GCGATTGAAC ATCTCGGTCT GGGCGGCGCT
GCGCCCTGGC TCGCGCTCGT CCTCATTGTC GGCATTGTTC CTGTCGCCTG GGTACTCATC
CGTCCCTCAC CGCAAAGCAT GGGCCTTGGG CCGGACGGAG ATCCGATTGC GCGCGATGAA
AGCGGCGTCC CGCTGCCTGC CGACGGCATC GACTTCGAGC GCGCGATACG CAGCCGTTTC
TTCATTTTCA CGACCGCGGC CTACATCTTC GCGATGATGG CGCAGGTGGG CACGATCGCG
CATCAATACA GTCTCATTTT TGCCCGGTCG GGCGATAGCG GTACTGCTCG CCTCGCCGTT
GCTAGCATGG CGGCGGCAAG CATTATCGGA CGCCTCGTCG GCGGCCAGGC ACTCGCCTAC
ATGCCGTCAC GTGGCTTTGT ACTGGGTCTG ACCGTCGTCC AGGGTGCGGC GCTTGCGTGC
TACGCTTTCG CCGAGAGCAC GCCGATGTTG ATTGCGACCA CAATCATCTT TGGTCTTACG
GTCGGAAATC TTCTGATGAT GCAGCCGCTG ATGGTAGCGG AAGCGTTCGG GCTGAAGGCC
TATGGGCGCG TTTATTCGCT CACTCAGCTT TTCATGACCG CCGGCGTTGC GACCGGGCCT
GCCGCCATTG GTTTTCTTTA TACCTGGCTT GGCGGATACG AAGTCGCTTT CCTCATCATG
GCAATATCTT CCCTCGTTGC TTTCGGGCTC ATCGTTGCGG CCGGCCCCGT TCGCGCGCTT
ATTGAGAGCA AACAGAATGC GTGA
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| Protein sequence | MSAESATRSD QEEPAPRFFY GWYVVGAVLV IMTVTAGLGF YNLSVYLKAF VVQGGFSVAA
TSGATACFFI ASGISGLGVA ALIERYDPRW VITAGAFFSA FATLGAGYVT ELWQLYLFYI
LFGVGYAGAA LIPGTTLVAR WFARRRSVAL SYASTGLSLG GILLTPLSAW AIEHLGLGGA
APWLALVLIV GIVPVAWVLI RPSPQSMGLG PDGDPIARDE SGVPLPADGI DFERAIRSRF
FIFTTAAYIF AMMAQVGTIA HQYSLIFARS GDSGTARLAV ASMAAASIIG RLVGGQALAY
MPSRGFVLGL TVVQGAALAC YAFAESTPML IATTIIFGLT VGNLLMMQPL MVAEAFGLKA
YGRVYSLTQL FMTAGVATGP AAIGFLYTWL GGYEVAFLIM AISSLVAFGL IVAAGPVRAL
IESKQNA
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