Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3098 |
Symbol | |
ID | 5454807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3309547 |
End bp | 3310662 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878687 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_001414362 |
Protein GI | 154253538 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.136599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.227792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCAT GGATTTGCGA TCGAAGCATC GCTAGACTGC GCGCAAATCG CCCTTATCCC CAGTGGACTG TCATGAAACT GCCATCGTTC TTTTACAAAC CGCTCGCCAT CGGTGCCCCG GCCCCCTACC GGGAGCTGCC CGTCGCCCTC GAACGGATGA TCCATTTCTT CCCCGGACAC AATGAGAAGC TCCGTTCGCG CCTCGGCGAG ATAATCCCGC AGGTCGATGT GCTGCTCGGC AACCTCGAGG ATGCGATTCC GGCGGACGCG AAGGAGGCGG CGCGGAAGGG TGTGATCGAG GTCGGCAAGA GCCATGATTT CGGATCGACC GGTTTCTGGG TCCGCATCAA TCCGCTGAAC AGTCCCTGGA TGCTGGACGA TGTGACGGAG CTCGTGGCCG AGATCGGCGA CAAGCTCGAC GTCATCATGC TGCCCAAGGT GGAAGGCGCA TGGGATATCC ACTATCTGGA CCAGCTGCTC GCACAGCTCG AGGCGAAGCA TGGGCTGAAG AAGCCGCTTC TCATTCACGC GATCCTCGAA ACCGCACAAG GCGTGAAGAA CGTGGAGGAG ATCGCCTGCG CCTCCCCCCG CATGCATGGC ATGAGCCTCG GCCCGGCGGA CCTCGCGGCA TCGCGAAAGA TGAAGACGAC GCGCGTCGGC GGCGGACATC CTTTCTACCG GGTGCTCGAA GACCCGAAGG AAGACGGCAG CCCCCGCATC GCCGCCCAGC AGGACCTCTG GCACTACACA TTTGCCAAAA TGGTGGACGC CTGCGTCGCG AACGACATCC GTCCCTTTTA CGGCCCCTTC GGCGACATTC AGGACGCGGA AGCCTGCGAG CAGCAGTTCC GCAATGCCTT CCTCATGGGC TGCGTCGGCG CATGGTCGCT GCATCCGAAC CAGATCGCGA TCGCCAAGCG CGTCTTCAGC CCGGACCCGG ACGAAGTGCA ATTTGCAAAA CGCATCCTGG AGGCCATGCC CGACGGCACC GGCGTTGCGA TGATCGACGG CAAGATGCAG GACGACGCCA CCTGGAAACA GGCAAAGGTG ATCGTCGATC TCGCAAAAAA GGTCGGGGCC AAAGACCCCG ACCTTGCAAA AGCCTACGGC TTCTGA
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Protein sequence | MRSWICDRSI ARLRANRPYP QWTVMKLPSF FYKPLAIGAP APYRELPVAL ERMIHFFPGH NEKLRSRLGE IIPQVDVLLG NLEDAIPADA KEAARKGVIE VGKSHDFGST GFWVRINPLN SPWMLDDVTE LVAEIGDKLD VIMLPKVEGA WDIHYLDQLL AQLEAKHGLK KPLLIHAILE TAQGVKNVEE IACASPRMHG MSLGPADLAA SRKMKTTRVG GGHPFYRVLE DPKEDGSPRI AAQQDLWHYT FAKMVDACVA NDIRPFYGPF GDIQDAEACE QQFRNAFLMG CVGAWSLHPN QIAIAKRVFS PDPDEVQFAK RILEAMPDGT GVAMIDGKMQ DDATWKQAKV IVDLAKKVGA KDPDLAKAYG F
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