Gene Plav_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3097 
Symbol 
ID5454806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3308434 
End bp3309537 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID640878686 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001414361 
Protein GI154253537 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.432151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.23226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGT CTGTCGCTCC CTTGTTCGAG CCTTTCACCA TCAACGGGCT CACACTGCCC 
AATCGCGTCG TGATGGCGCC CATGACACGG TCGCAGTCGC CGGGCGGCAT TCCGGGCCCG
GAGGTCGCCG CCTATTACCG GCGCCGCGCG GCTGCCGAAT GCGGTCTCAT CGTCACCGAG
GGTACGACCG TCAACTCGCC CGTCGCGACG GGTGACCCGA ACGTACCCCA GTTCTGGGGC
GATGAGGCCC TCAAGGGCTG GAAGCGCGTG GTCGAGGAAG TCCACGATGT CGGCGGAAAG
ATCATGCCGC AGATCTGGCA TGTCGGCATG ACGCGTAACC CTGCGAAATC CACCAATCCG
GATCTTCCGA GCCACGGTCC TTCGGGCCTC GTCAAGCCGG GCAAGGCCGT TTCCGAGCCG
ATGACCAAAA AGGAAATCAA GGACACGATC GAAGCCTTCG GGCGGGCTGC GGCAGACGCG
CGGGCGATCG GCATGGACGG CGTCGAGATT CACGGTGCCC ATGGCTATCT GATCGACCAG
TTCTTCTGGG AAGGCACCAA TATCCGCGAC GATGAATATG GTGGCGATCT TGTCGGCCGC
ACGCGCTTTG CCGTCGAAAT CATCGAGGCG ATCCGGCGGG AGGCCGGCAA GGACTTTCCG
CTCATCCTGC GCTTCTCGCA GTGGAAGCAG CAGGACTACA CCGCGAAGCT CGCCCAGACG
CCGGAAGAGC TCGGGGCTTT CCTGAAGCCG CTTTCCGATG CGGGCGTCGA TGTCTTCCAT
TGCTCGCAGC GTCGCTTTTG GGAGCCGGAA TTCGAGGGCT CCGATCTCAA CCTCGCGGGC
TGGACGAAGA AGCTCACCGG CAAGCCGTCG ATCACGGTCG GCAGCGTCAG CCTGTCGGGT
GAATTCATTG CCTCCTTCGG CGGCGAAAGC TCTGAAGCCA CCGGCATCGA CGATCTGCTG
GACCGGCTGG AGAAAGACGA GTTCGACCTC GTCGCGGTCG GCCGCGCGCT GCTGGTCGAT
CCGGCCTGGA CGCAGAAGGT GCATCAGGGC GCGTTCGACA AGCTGATGCC GTTCAATCCC
GCGGCGCTCG CGACGCTCTC GTAA
 
Protein sequence
MSRSVAPLFE PFTINGLTLP NRVVMAPMTR SQSPGGIPGP EVAAYYRRRA AAECGLIVTE 
GTTVNSPVAT GDPNVPQFWG DEALKGWKRV VEEVHDVGGK IMPQIWHVGM TRNPAKSTNP
DLPSHGPSGL VKPGKAVSEP MTKKEIKDTI EAFGRAAADA RAIGMDGVEI HGAHGYLIDQ
FFWEGTNIRD DEYGGDLVGR TRFAVEIIEA IRREAGKDFP LILRFSQWKQ QDYTAKLAQT
PEELGAFLKP LSDAGVDVFH CSQRRFWEPE FEGSDLNLAG WTKKLTGKPS ITVGSVSLSG
EFIASFGGES SEATGIDDLL DRLEKDEFDL VAVGRALLVD PAWTQKVHQG AFDKLMPFNP
AALATLS