| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3091 |
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| Symbol | |
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| ID | 5455443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3302029 |
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| End bp | 3302952 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878680 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001414355 |
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| Protein GI | 154253531 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.171108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA GGCTTGGAGG ATGGCGCGAG CGGCTGAAGC TGCCGCTGGT GGCGGCGCCG
ATGTTCCTGA TTTCAGGGCC GGAACTGGTG CTGGCGGCCT GCCGGGAAGG CGTCATCGGT
TCCTTTCCGA CGCCGAACGC GCGCACGGTG GCGGTGCTCG ACGAATGGCT CGACAGCATC
ACCTCGGGCC TCGATGGCAG CCATGCGCCC TGGGCCGCGA ACGTCGTCGT CCATCGCTCG
AACACCCGGC TCGACGAGGA TCTCGATCTC GTCATCCGCT ACAAGGCGCC GCTGGTCATT
ACCGCGCTGG GGAGTCCGCG CGCCATCGTC GAGCGCGTGC ATGGCTATGG CGGGCTTGTC
TTCGCCGATG TGAACTCGGT TCCCTTCGCG CGCAAGGCCG TGGAGGCGGG CGTCGACGGT
CTCGTATTGG TGGCCGCCGG TGCGGGCGGC CACACGGGCA ACATGACCGG CTTCTCCTTC
GTGCCCGCAG TCCGCGAATT TTTCGACGGG CCGGTCATCC TCGGGGGCGG CATCACCGAT
GGCGCGGGCA TCCGCGCGGC GGAGGTGCTG GGGGCCGACC TCGCCTATAT GGGCACGCGC
TTCATCGCCT GCGAGGAAAG CATGGCCGCG CCCGCCTATC GCGACATGCT GATCTCCTCC
ACCGTCGACG ACCTTATCCT CACCCGCGCA ATCACGGGCG TGGCGGCCAA TTGGCTGAAG
CCGAGCATCG CGCTGGCGGG ATATGACCTC GATGCGATGG AGAAAAGCCC GGATATCGAC
TTCACCGACC CGCAGTCGGG CGCGAAACGC TGGGCACAGG TCTGGTCCGC CGGCCACGGA
GTGGGCATGA TCGACCGGAC GGAAACGGCG GCGAGCCTGA TCGCGAGACT GCGGCGGGAA
TACGAGGACG CCAAGAAAAG ATAA
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| Protein sequence | MSERLGGWRE RLKLPLVAAP MFLISGPELV LAACREGVIG SFPTPNARTV AVLDEWLDSI
TSGLDGSHAP WAANVVVHRS NTRLDEDLDL VIRYKAPLVI TALGSPRAIV ERVHGYGGLV
FADVNSVPFA RKAVEAGVDG LVLVAAGAGG HTGNMTGFSF VPAVREFFDG PVILGGGITD
GAGIRAAEVL GADLAYMGTR FIACEESMAA PAYRDMLISS TVDDLILTRA ITGVAANWLK
PSIALAGYDL DAMEKSPDID FTDPQSGAKR WAQVWSAGHG VGMIDRTETA ASLIARLRRE
YEDAKKR
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