| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3088 |
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| Symbol | |
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| ID | 5456895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3298444 |
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| End bp | 3299574 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878677 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001414352 |
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| Protein GI | 154253528 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.135357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGCG GACCGCTGAG CGGCATCAAG GTTGTCGAAT TCGCAGGAAT TGGGCCGGGG
CCCTTCTGCG CGATGCTGCT CTCCGATATG GGAGCGGATA TTATCCGCAT CGACCGCAAG
GGCGGACGCG GCGGCTCCAA ATACGATATC GGCTCCCGTG GCCGACGCTC GGTGGCGCTG
GACCTCAAGA AGCCGGAATC GGTCGAGGCC TGTCTGAAGC TGATCGAAAA TGCGGACATC
CTGCAGGAAG GCTTCCGTCC CGGCGTGATG GAACGTCTCG GCCTCGGCCC CGATGTATGC
CTCAAGCGCA ATCCGAAGCT CGTCTATGGC CGCATGACCG GCTGGGGCCA GACCGGCCCA
CTGGCGAATG CTGCCGGACA CGACATCAAC TACATTTCGC TCACCGGCGC GCTTCACGCC
ATCGGCCGGC CAGGTGAAAA GCCCGTTCCG CCGCTCAACC TCGTGGGCGA TTTCGGCGGC
GGCGCGCTTT ATCTCGCCAT GGGCATGCTC GCGGCGCTTG TCGAGGCGCA GCGCAGCGGC
AAGGGGCAAG TGGTCGACGC CGCCATGACC GACGGTGCAA CCTCGCTGAT GGCCATGTTC
TACGGGTTCA CGGCATCCGG CATGTGGCAG GAGCCGCATG GCACCAACAT GCTCGATGGC
GGCGCGCATT TTTACGACAC CTACGAGACG AAGGACGGCA AGTGGATTTC GATCGGTTCG
ATCGAGCCGC AATTCTACGC CATTCTCCGC GAGAAGGCCG GGCTTACCGA TGCCTATTGG
GATGCGCAGA TGGATCGCGG CCAGTGGCCC GAGATGAAAA AGAAGATCGA AGCCGTCTTC
AAGACGAAGA CCCGCGACGA ATGGTGTTCG ATCATGGAAG GCACGGACAT CTGCTTCGCA
CCGGTTCTCT CGATCAGCGA AGCCATCGAC CATCCGCACA ACAAGGCGCG CCAGACCATC
GTCGAGATTG ACGGTGTGGC GCAGCCCAAC ATCGCGCCAC GTTTCTCGCG CACGGAGTCA
AAAATCCAGG GTCCGGCGCC GACAGTCGGC GAACACACGG AGAGTGCCCT GAAGGATTGG
GGCTTCTCGG CCGGCGACAT CGAAGGGCTG AAAAAGGCGG AAGCGATTTG A
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| Protein sequence | MGSGPLSGIK VVEFAGIGPG PFCAMLLSDM GADIIRIDRK GGRGGSKYDI GSRGRRSVAL
DLKKPESVEA CLKLIENADI LQEGFRPGVM ERLGLGPDVC LKRNPKLVYG RMTGWGQTGP
LANAAGHDIN YISLTGALHA IGRPGEKPVP PLNLVGDFGG GALYLAMGML AALVEAQRSG
KGQVVDAAMT DGATSLMAMF YGFTASGMWQ EPHGTNMLDG GAHFYDTYET KDGKWISIGS
IEPQFYAILR EKAGLTDAYW DAQMDRGQWP EMKKKIEAVF KTKTRDEWCS IMEGTDICFA
PVLSISEAID HPHNKARQTI VEIDGVAQPN IAPRFSRTES KIQGPAPTVG EHTESALKDW
GFSAGDIEGL KKAEAI
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