Gene Plav_3073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3073 
Symbol 
ID5455681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3281779 
End bp3282276 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content57% 
IMG OID640878662 
Producthypothetical protein 
Protein accessionYP_001414337 
Protein GI154253513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.590013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.400925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTACA CCGAAATCGA TATATCGGCC ATCTCGTCCC GGCACCCTGT GTGGGCCTTC 
AATGCCTACT GGACTCAACA GGCGCGGGCG ACCGGCGTGC CGTGCCGCCA GCAGATAAAC
CCTGCTGAAA TTGCCGGAAT TTTGAGTTGG CTTCTGGTGC TCGAAGCGAT ATCGCAGCGC
ACCGGCACCG AATACCGCTA CCGCCTTGCG GGAACCGGTT GCACGGAATT ATTCGGTGTC
GACTATACCG GCAAAACGCT GGGTGAAAAT CTCACCCCCG AAGGTGCCGA GATCCGCCGG
CTTGAATTTA GCCGTGTGCT CGTGACGTAT CGCCCAATTT TCTCGATTAC TCACCTCCCG
ATCAAGAAAC GCGAGTTCAT TACCGTGCAT CGCGGTGTCT TTCCGGTCTC ATCTTCCGGG
GCGGAGGTGG ATCAGATTTT TGTGGTGATA GCCCCGACAG CGACCGAATG CATCTCCAGG
AGCACGCTCG CCGCTTAA
 
Protein sequence
MPYTEIDISA ISSRHPVWAF NAYWTQQARA TGVPCRQQIN PAEIAGILSW LLVLEAISQR 
TGTEYRYRLA GTGCTELFGV DYTGKTLGEN LTPEGAEIRR LEFSRVLVTY RPIFSITHLP
IKKREFITVH RGVFPVSSSG AEVDQIFVVI APTATECISR STLAA