| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3067 |
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| Symbol | |
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| ID | 5453748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3272961 |
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| End bp | 3274784 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878656 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_001414331 |
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| Protein GI | 154253507 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.82118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGCA TTGTCGGCAT CATTGGAACG AAGCCTGTTG CGCCCATTAT TCTGGAGGCG
TTGAAACGTC TCGAATATCG CGGCTATGAC AGTGCGGGGA TTGCAACGCT GTCGGGCGGG
GAAATCATTC GCCGGCGCGC GGAAGGCAAG CTCGCAAATC TGGAACGTGC GCTCGACGAC
AATCCGCTCG ACGGCATTAT AGGCATTGGC CATACGCGCT GGGCAACGCA TGGCGCTCCC
GTCGAAAGGA ACGCGCATCC TCATGTGACG GACCGTGTCG CTATCGTCCA TAACGGCATT
ATCGAGAACT TTCGGGAGCT GCGCGAGAGG CTGACTGCCG GGGGAGCCAT TTTCACGACG
GAAACGGACA GCGAAGTCAT CGCGCATCTC GTGACCCATT ATCTCGACCA GGGGATTTCT
CCCCGGGAGG CCGCCAGCGC CGCGCTCACG GAACTGGAGG GCGCGTTTGC GCTCGGCATC
ATTTTTCGTG GCGAGGAAGA TCTGATCATC GGTGCGCGTC GCGGCCCTCC CTTGGCCGTC
GGATATGGCG ATGACGCCAT GTATCTCGGC TCCGATGCAT TCGCACTTGC CCCCATGACC
AGCCGTGTCA GCTTCCTCGA AGATGGCGAC CGGGTAGAGA TCACTCGTAC CTCGGTTGCG
GTTTTCGATG TCCATGGGCA ACCGGTCAAA CGTCCCATCC GGATTGCCGA TGTCTCGGCT
GCCCTGGTCG ACAAGGGCAA TCACCGCCAT TTCATGGCGA AGGAAATTTT TGAACAGCCC
GAGGTCATCG GACACACGCT TTCGGAATAT GTGAACCCGC TCGACGATAC GATCCGGAAC
ACGGACCTGC CCGTTGATCT CGCATCCGTC CCCCGCATCA CCATCGTGGC CTGCGGTACC
GCTTATTACG CCGGCCTCGT GGCGAAGTAC TGGTTCGAAA GATATGCCCG GGTCTCCGTC
GAGGTGGATA TTGCCTCCGA GTTCCGGTAC CGCGATGCGG CGCTGACGGA AGGCGGCCTC
GCCATCTTCA TTTCACAATC GGGCGAGACG GCCGACACGC TGGCCGCCCT TCAATATTGC
CGTGCACAGG GACAAAAGAT CCTGTCGGTC GTGAATGTGA CTGAATCCTC CATCGCGCGC
GCCTCGGACG CGATCCTGCC GACTTTTGCC GGACCTGAAA TCGGGGTCGC TTCGACAAAG
GCCTTTACAT GCCAGCTCAC GACGCTGGCG GTGCTGGCTA TTCGCACGGG CATTGCACGT
GGGGCGGTTG ACAAGACAGA TGAAGCGCGG CTGGTGCGTA CACTGATGGA AATACCGCGT
CACGTCGCCG AAGCTCTGGC GAGCGATGAA CATATTCAGA CATTGAGCGC GGACCTCGCC
AAGGCGCGGG ACGTACTCTA TCTCGGGCGC GGGCATAACT ATCCGATCGC GTTGGAAGGC
GCCCTGAAGC TCAAGGAAAT TTCCTATATC CACGCCGAAG GCTATGCCGC CGGCGAACTC
AAGCACGGTC CCATCGCGCT TATCGATGAG GAAGTGCCGG TCGTGGTGAT CTCACCTGTC
GATGAGCTGT TCGATAAAAC GATTTCGAAC ATGCAGGAAG TAATCGCGCG CGGCGGCCGG
GTGGTCCTGA TTTCCGACAA GGCGGGGATT GCGCGTGCCG GGGATGGTCT CTGGGCCGAA
ATCGAAGTGC CGCCGGTGGA TCCGCTGATT GCCCCCATCG TCAATGCGAT CCCGGTGCAA
CTGCTCGCCT ATCACACCGC CGTTTCCAAG GGCACCGACG TCGACCAGCC GCGTAATCTG
GCGAAATCGG TGACTGTGGA ATAG
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| Protein sequence | MCGIVGIIGT KPVAPIILEA LKRLEYRGYD SAGIATLSGG EIIRRRAEGK LANLERALDD
NPLDGIIGIG HTRWATHGAP VERNAHPHVT DRVAIVHNGI IENFRELRER LTAGGAIFTT
ETDSEVIAHL VTHYLDQGIS PREAASAALT ELEGAFALGI IFRGEEDLII GARRGPPLAV
GYGDDAMYLG SDAFALAPMT SRVSFLEDGD RVEITRTSVA VFDVHGQPVK RPIRIADVSA
ALVDKGNHRH FMAKEIFEQP EVIGHTLSEY VNPLDDTIRN TDLPVDLASV PRITIVACGT
AYYAGLVAKY WFERYARVSV EVDIASEFRY RDAALTEGGL AIFISQSGET ADTLAALQYC
RAQGQKILSV VNVTESSIAR ASDAILPTFA GPEIGVASTK AFTCQLTTLA VLAIRTGIAR
GAVDKTDEAR LVRTLMEIPR HVAEALASDE HIQTLSADLA KARDVLYLGR GHNYPIALEG
ALKLKEISYI HAEGYAAGEL KHGPIALIDE EVPVVVISPV DELFDKTISN MQEVIARGGR
VVLISDKAGI ARAGDGLWAE IEVPPVDPLI APIVNAIPVQ LLAYHTAVSK GTDVDQPRNL
AKSVTVE
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