| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3060 |
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| Symbol | |
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| ID | 5455634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3265296 |
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| End bp | 3266177 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878649 |
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| Product | SH3 type 3 domain-containing protein |
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| Protein accession | YP_001414324 |
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| Protein GI | 154253500 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTA TGGCAGAACA CAGACAGGAA ATCGGCGAGA CGCTGCGCGA CGCGCGGCAA
GCGGCCGGAT TGTCATTGAA GGATATTGCC GACCGGCTCA GGATCAGGCC GGTCTATCTG
CAGGCGATCG AGGCAGGACA GTTCGAGCTG CTGCCGGCAT TGCCGCAGAC CGTCGGCTTC
ACGCGCGCCT ATGCGAAGTT TCTCGATGTC GATGTCGAGA GGCCGCTGTC GCGTCTCGGC
GAGGAAGTTC ACAAGCATAT CGAAAGCGCG GATTATTCCG AGCCGGAGTT GCCCTGGTCG
CAGGTGTCGC GCGCGCGTAT CGCTTATGTC GTGACCGGCG CTTTCATCGG CGCGGTTGTT
CTTGCCGCGC TGCTGTTCGA TTTCGGTGTG CCGCGCGATG AGATCAACGA AGCCGTTGCC
GCAGCCGAAG GTCTTTTCGA GCAGCAACCC CTGCCGATGC GCGAGCCGGT CCGCTCCATG
CCCATCGCGA GTGCCGAGCC GCGCGCGCCT GCCATTCCCG CTCCCGTTGC CATCTCGGCG
GCGCCTGCGC CTTCCGCTCC TTCATCCGTG GGCGGATCGT CTCCCGTCAC GGCTGAGTTC
GCCGCTCTCC TGTCGCGTCC CGCTGTGGAG GCTACACCCG CTCAAGAAGC CGCCACCGTC
GCGCCGATGG AAGACGCGAA TGCCTTCGCC ATCTCGAACG TCTATCTCCG TGCGTCGCCC
GGCAATGCGG GCGAGGTGAT CGGCGTGCTT GATGCGTGCG AGCCGTTGCG GCTTGTCGGT
CAGGATGAGG GTGCGCAGTG GCACCGGATC GAGCGGGCGG ATGGGACCGC CGGCTGGGTC
TTCCGCAGAT ATGTCGGGGA CAAGGCCGCC GGTTGCTCGT AA
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| Protein sequence | MTRMAEHRQE IGETLRDARQ AAGLSLKDIA DRLRIRPVYL QAIEAGQFEL LPALPQTVGF
TRAYAKFLDV DVERPLSRLG EEVHKHIESA DYSEPELPWS QVSRARIAYV VTGAFIGAVV
LAALLFDFGV PRDEINEAVA AAEGLFEQQP LPMREPVRSM PIASAEPRAP AIPAPVAISA
APAPSAPSSV GGSSPVTAEF AALLSRPAVE ATPAQEAATV APMEDANAFA ISNVYLRASP
GNAGEVIGVL DACEPLRLVG QDEGAQWHRI ERADGTAGWV FRRYVGDKAA GCS
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