Gene Plav_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3058 
Symbol 
ID5455770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3263982 
End bp3264383 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content60% 
IMG OID640878647 
ProductGreA/GreB family elongation factor 
Protein accessionYP_001414322 
Protein GI154253498 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.26553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGA TTGTCGTGGA CGATCTTCCG CAGATCGTCG TGGCGGAAGA GCAATTCGAC 
GCGCTGTCGG ATATTGCCGA AGGCCTGACC GGCGTGCTGC CGCATGTCGC GGGCTTTCTC
GACCGCGAAC TCAACCGCGC CCGGCTGCTG CCGCTGGCGC ATGTACCGTC CGATGTAGTG
AAGGTGAATT CCACCGTCGA ATTCACCCTC GACACCAGAG GCGAGCGCGT GGAAAGGCTG
AAGCTTGCTT TTCCGGCGGA AAGCACAGCC GGTGATGGAT ATGTTTCCAT CGCTTCGCCG
GTTGGCGTCG CCCTTCTCGG TCTTCGCGAA GGACAGTCCA TTGAATGGAC CTCGCGCTAT
GGCGAGCGGC GTTCGCTCAA GGTCCTGAAG GTGACGGGAT AG
 
Protein sequence
MQTIVVDDLP QIVVAEEQFD ALSDIAEGLT GVLPHVAGFL DRELNRARLL PLAHVPSDVV 
KVNSTVEFTL DTRGERVERL KLAFPAESTA GDGYVSIASP VGVALLGLRE GQSIEWTSRY
GERRSLKVLK VTG