Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3056 |
Symbol | |
ID | 5455207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3262970 |
End bp | 3263491 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640878645 |
Product | hypothetical protein |
Protein accession | YP_001414320 |
Protein GI | 154253496 |
COG category | [S] Function unknown |
COG ID | [COG3812] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.020297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCT CGCTTTATGA AATTGCCGTT CCGAACTACC TGCAGACGCT CACCGCCGTC TCCGGCTTCC TGAAAAAGGG CGCCGCCTTC TGCGAGGAGC AGGGCACCAA TCCGAACGAC ATCGTCGCCG CGCGCGTGAT CGACGACATG CTGCCTTTCA GCTTCCAGAT CGCCTCCATC GCGCATCATT CCTTCGGTGC CGTCGAGGGC GTCCAGAGCG GTACATTTTC GCCGCCGAAA GACCCCGGCA CGCATGATTA TGCGAGCCTG CAGAAGCTGG TCGATGACGC GAAAGCCGGT CTCGAAAAAG TAACGCCGGA TGCGCTCGAC GCCTTTCAGG GCAAGGACGT CATCTTCCAT CTCGGCAAGC ACCAGCTTCC CTTCACGGCG GAAAATTTCC TGCTTTCCTT CTCCTTCCCG AATTTCTATT TCCACGCCTC CACGGCCTAC GACATCCTGC GCGCACGCGG CGTAAAAATC GGCAAGGCGG ATTTCATCGG CCCGCTGCGC ATGAAGATGT AA
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Protein sequence | MSLSLYEIAV PNYLQTLTAV SGFLKKGAAF CEEQGTNPND IVAARVIDDM LPFSFQIASI AHHSFGAVEG VQSGTFSPPK DPGTHDYASL QKLVDDAKAG LEKVTPDALD AFQGKDVIFH LGKHQLPFTA ENFLLSFSFP NFYFHASTAY DILRARGVKI GKADFIGPLR MKM
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