Gene Plav_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3056 
Symbol 
ID5455207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3262970 
End bp3263491 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content59% 
IMG OID640878645 
Producthypothetical protein 
Protein accessionYP_001414320 
Protein GI154253496 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.020297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCT CGCTTTATGA AATTGCCGTT CCGAACTACC TGCAGACGCT CACCGCCGTC 
TCCGGCTTCC TGAAAAAGGG CGCCGCCTTC TGCGAGGAGC AGGGCACCAA TCCGAACGAC
ATCGTCGCCG CGCGCGTGAT CGACGACATG CTGCCTTTCA GCTTCCAGAT CGCCTCCATC
GCGCATCATT CCTTCGGTGC CGTCGAGGGC GTCCAGAGCG GTACATTTTC GCCGCCGAAA
GACCCCGGCA CGCATGATTA TGCGAGCCTG CAGAAGCTGG TCGATGACGC GAAAGCCGGT
CTCGAAAAAG TAACGCCGGA TGCGCTCGAC GCCTTTCAGG GCAAGGACGT CATCTTCCAT
CTCGGCAAGC ACCAGCTTCC CTTCACGGCG GAAAATTTCC TGCTTTCCTT CTCCTTCCCG
AATTTCTATT TCCACGCCTC CACGGCCTAC GACATCCTGC GCGCACGCGG CGTAAAAATC
GGCAAGGCGG ATTTCATCGG CCCGCTGCGC ATGAAGATGT AA
 
Protein sequence
MSLSLYEIAV PNYLQTLTAV SGFLKKGAAF CEEQGTNPND IVAARVIDDM LPFSFQIASI 
AHHSFGAVEG VQSGTFSPPK DPGTHDYASL QKLVDDAKAG LEKVTPDALD AFQGKDVIFH
LGKHQLPFTA ENFLLSFSFP NFYFHASTAY DILRARGVKI GKADFIGPLR MKM