| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3052 |
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| Symbol | |
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| ID | 5455853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3257045 |
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| End bp | 3257518 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878640 |
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| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
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| Protein accession | YP_001414316 |
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| Protein GI | 154253492 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.105588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATA TCAAAGACCC GGAAAACACC CTCGTCATGG AAATTCCCCA TGGCGAAGTC
ATCATCGAAA TGCGCCCCGA TCTCGCGCCG AAGCATGTCG CGCGGATCAA GGAACTGGCG
CGCGAGGGCT TCTACAATGG CGTTGCCTTC CACCGCGTCA TCGACGGCTT CATGGCGCAG
GGCGGCGATC CGACCGGCAC CGGCTCCGGC GGTTCGGGCA AGAAGATCCC GGCCGAATTC
TCCAAGGAGC CGCATGTGCG CGGCATCTGC TCGATGGCCC GCACGCAGGA CCCGAACAGC
GCCGACTGCC AGTTCTTCAT CTGCTTCGGC GACACGCGCT TCCTCGACAA CCAGTACACC
GTCTGGGGCA AGGTCGTCTC TGGCATGGAC GCCGTCGACA AGCTGAAGCG CGGCGAACCC
GTCCGCGACC CCGACCGCAT CGTCTCCATG CGCGTCGCCG CCGACGCGGC ATAA
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| Protein sequence | MTDIKDPENT LVMEIPHGEV IIEMRPDLAP KHVARIKELA REGFYNGVAF HRVIDGFMAQ
GGDPTGTGSG GSGKKIPAEF SKEPHVRGIC SMARTQDPNS ADCQFFICFG DTRFLDNQYT
VWGKVVSGMD AVDKLKRGEP VRDPDRIVSM RVAADAA
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