Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3051 |
Symbol | |
ID | 5455501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3256477 |
End bp | 3257022 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878639 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001414315 |
Protein GI | 154253491 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0985269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGAC TGACACATAT AATGATGGCG TTCGTTCTCG CCGCCGGCAT GGCCGTGCTG CCGGGCCGTG CCTCCGCCGC CGATCTCGAA AACACCATCT ATCTCGACCT GAAGGATGGC CGCGTCGTTA TCGAGCTGCT GCCGGAAATC GCGCCGGAGC ATGTCGAGCG GATCAAGACC CTCGCGCGCG AGGGCTTCTA TGATGGCATT GTCTTCCACC GCGTCATCCC GGGCTTCATG GCCCAGACGG GCGATCCGAC CGGCACCGGC ATGGGCGGCT CGATGCTTCC CGATCTCCGT GCCGAGTTCA CGCGCGAGGA AAGCTTCCAG CGCGGCACGC TCGGCATGGC GCGCTCGCAG AGCCCGAACA GCGCCAACAG CCAGTTCTTC ATCGTCTTCG ACGATGCGAG CTTCCTCGAC GGCGAATACA CGCTGTTCGG CCGCGTGGTC GAAGGCATGG AGCATGTCGA CAACATCGCC GCCGGCGAAC CGCCTGCCAA TCCCGACAAG ATCGTGAAGA TGCAGGTCGC GGCAGACGCT CAGTAA
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Protein sequence | MARLTHIMMA FVLAAGMAVL PGRASAADLE NTIYLDLKDG RVVIELLPEI APEHVERIKT LAREGFYDGI VFHRVIPGFM AQTGDPTGTG MGGSMLPDLR AEFTREESFQ RGTLGMARSQ SPNSANSQFF IVFDDASFLD GEYTLFGRVV EGMEHVDNIA AGEPPANPDK IVKMQVAADA Q
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