| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3043 |
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| Symbol | |
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| ID | 5455961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3244143 |
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| End bp | 3245570 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878631 |
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| Product | amidase |
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| Protein accession | YP_001414307 |
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| Protein GI | 154253483 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.020866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG GCGAATATAC GCGCTATGAC GGACTGGGGC TCGCCGAGCT GGTGCGCAAG
GGCGATGTAA AAGCGGAAGA GCTTGCCGAA GAAGCCATCG CGCGGATCGA AAAGCACAAT
CCTGCCATCA ACGCGGTCGT ATCGAAGCTC TATGACATTG GCCGCGCCGC TGCAAAAGCA
CCCGTCGACG GCCCCTTCAA GGGCGTGCCT TTTCTGCTGA AGGACGCATT CGGCGACCTC
GCCGGCACGA CAACGCGCCT CGGCTCACGC TTTCGGGCAG GCACTGCGGC GACGGAAGAC
GCGGCACTGG CGAAGCGCTT CAAGAAGGCG GGGCTGAGCA TTCTCGGCAA GACGAATGTG
CCTGAATTCA CGCTTCTGCC GACCACCGAA AGCGCGCTTT ACGGACCCGC GCGCAACCCC
TGGAACGTGA ACCATTCGAC CGGCGGCTCC TCGGGCGGCG CGGCGGCAGC TGTCGCCGCC
GGCCTTGTTC CGTTGGCTCA CGCAAATGAC AGCGGCGGCT CCATCCGCAT TCCGGCTTCT
TCATGCGGGC TGGTGGGATT GAAGCCGACA AGGGCACGGA CCTCGCTCGG ACCGGATTAT
GGAGATGTGC TGAGTGGGCT CTGCCATGAA CATGTGGTGA CGCGCAGCGT GCGTGACAGT
GCTGCGATGC TCGACTGCAC ACACGGCTAT GAACCGGGCG CGCCCTATGC CGCGCCGCAT
GTGGAGCGGC CTTTTCTCGA GGAAGCCGGA CGCAAGCCCG GCAAGCTGCG CATCGCTTTC
AGCAAGACGA ACCCGGCGGG AAACCCGCTT CACGCCGACT GCGTGAAAGG CGTGGAAGAG
ACGGCGAAGC TGCTCGCCGA TCTCGGCCAC GAGGTTGTGG AAGCGGCGCC GCCGCTGAAG
CCTGAGGAAC CGGGCAGCAT CTTTCTGCCC ATGTGGGCCT CCTGGCTCGC CTCGGAAATC
GAGGGCGAGG CACTGCGGCG CGGGCGCGGG CCGAAGGAAG ATGAACTGGA AGGGCTGACC
TGGGGACTTT ATGAAATCGG CAAGCAGGTG AGCGCCGCTC AATACCTGAT GCTGGTGAAG
GAGGCGCAGG CCATGACCCG GCGCGTAGCG GGCTTCATGG AAAGCCACGA TGTGTGGCTG
ACGCCGACAC TGGCCTCCCC GCCCATTCCG CTCGGCCTTA TCGATATCAA TGAGCGCGAT
CCGCTGAAGG CATTCGCCCC GGCTGTCGAC TATGTGCCTT TCACGCCGAT CCAGAACCTG
ACGGGACAGC CGGCGATTTC GCTGCCGCTT GCCATGTCTT CGGACGGGCT GCCCGTCGGC
ATGATGTTCT CGGCCCGCTT CGGCGACGAG GCGACGCTGT TCCGCCTCGC GGCGCAGCTT
GAAGAAGCGC GGCCCTGGAA GGACAGACAT CCGGCGATCT GGAACTGA
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| Protein sequence | MSFGEYTRYD GLGLAELVRK GDVKAEELAE EAIARIEKHN PAINAVVSKL YDIGRAAAKA
PVDGPFKGVP FLLKDAFGDL AGTTTRLGSR FRAGTAATED AALAKRFKKA GLSILGKTNV
PEFTLLPTTE SALYGPARNP WNVNHSTGGS SGGAAAAVAA GLVPLAHAND SGGSIRIPAS
SCGLVGLKPT RARTSLGPDY GDVLSGLCHE HVVTRSVRDS AAMLDCTHGY EPGAPYAAPH
VERPFLEEAG RKPGKLRIAF SKTNPAGNPL HADCVKGVEE TAKLLADLGH EVVEAAPPLK
PEEPGSIFLP MWASWLASEI EGEALRRGRG PKEDELEGLT WGLYEIGKQV SAAQYLMLVK
EAQAMTRRVA GFMESHDVWL TPTLASPPIP LGLIDINERD PLKAFAPAVD YVPFTPIQNL
TGQPAISLPL AMSSDGLPVG MMFSARFGDE ATLFRLAAQL EEARPWKDRH PAIWN
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