| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3042 |
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| Symbol | |
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| ID | 5456000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3242692 |
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| End bp | 3244122 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878630 |
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| Product | amidase |
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| Protein accession | YP_001414306 |
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| Protein GI | 154253482 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.136828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCTT TTACGGAATA TGCGGACCAT GACGGACTGA GCCTCGGCGA GCTCGTGAAG
AAGGGCGAGG TGACGCCGCT GGAACTTGTC GACGCCGCCA TAGAGCGCAC CGAAAAGCAC
AATGGCACGC TGAACGCGGT GGTCTATTCC GCCTTCGACG AGGCGCGCGA GACCGCGAAG
GGCAAACTGC CGGACGGACC TTTCAAGGGC GTTCCGTTTC TCATCAAGGA TCTCGGCACC
GAAGTGAAAG GCTGGCCGCG CACCAGCGGC AGCAAGTTCG TCGCGAAGAT CGTCGACGAT
CACGACAGCG AGCTGGTGAA ACGCTACCGC GCGTCGGGCA CTGTGCTGTT CGGGAAAACC
AACACACCCG AATATGGCAT CACCGGCACG ACGGAATCCC GCCTGCTCGG GCCTTGCCGC
AATCCCTGGG ACCCGAACCG TATTTCCGGC GGCTCGTCGG GCGGCGCGGC CTCGGCCGTG
GGTGCGGGCA TCCTGCCGCT CGCGCATGCA TCGGACGGGC TCGGCTCGAT CCGCATTCCG
GCGGCCTGTT GCGGCCTTGT CGGCATGAAG GTGACGCGTG ACCGCAACCC GCAAGGGCCT
GACGATTTCG ACCGCGCCAT CGGCTTCAGC GTCGACCATG TCGTGAGCCG CACCGTGCGC
GACAGTGCCG CGATGCTGGA CGCGACCGGC TATCCAGAAC CCGCCTCGCC CTACGCGCCG
CCGCCGAAAG AGCGGCCCTA TATGGAGGAG ATCACCCGGA GCCCCGGCAA GCTGAAGATC
GCCTGGTCGA GCGAGACGCC GGGCGGCAAA CCCATCCATC CCGAAATTCA GGCGGCGCTG
GAGAAGACGG CCGATGTGCT CGCGAAGCTC GGCCACACCG TGACGCCGCG CGGCCTCGGC
ATCGACTATC GCCAGCTCTA CCGTGCGCAG GGCGCCGTTT CGGGCTCGAA TTTCGCGGCC
GGCATGCTGC GGCGGATCGA GGCGATGGGC CGCGAGCCGG AACAGGACGA GCTGGAGCCG
CTGACCTGGG CTGGCTTCAA GAACGGCAGC AAGCTGACCG GCGCACAGGC CATGTGGGGC
TGGCAGCAGC TTCGGCTGAT GAACCGGCAG GTGCTGTCGG TATTCGAGGA TGTGGACGTC
TATCTCTGCC CGGTGCTCGG CCAGTTGCAG CCGGAAATCG GCCACCTCGG GCCGGACCAG
GAACCGCGCG AGCTGAACAA GAAGCAGGGG CAGGTCTTCC CCTTCACCCC GCCCTTCAAC
TTCACCGGCC AGCCCTCGCT CTCGCTGCCG CTCTGGCAGT CCGAGAATGG CCTGCCCATA
GGCATGATGT TCACCGGGCG CTACGCCGAT GAGGCGACGC TGTTCCGGCT GGCGGCACAG
CTGGAGAAGG AACTGCCGTG GAGCGGGCGG AAGCCGAAGG TGTGGAACTG A
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| Protein sequence | MMAFTEYADH DGLSLGELVK KGEVTPLELV DAAIERTEKH NGTLNAVVYS AFDEARETAK
GKLPDGPFKG VPFLIKDLGT EVKGWPRTSG SKFVAKIVDD HDSELVKRYR ASGTVLFGKT
NTPEYGITGT TESRLLGPCR NPWDPNRISG GSSGGAASAV GAGILPLAHA SDGLGSIRIP
AACCGLVGMK VTRDRNPQGP DDFDRAIGFS VDHVVSRTVR DSAAMLDATG YPEPASPYAP
PPKERPYMEE ITRSPGKLKI AWSSETPGGK PIHPEIQAAL EKTADVLAKL GHTVTPRGLG
IDYRQLYRAQ GAVSGSNFAA GMLRRIEAMG REPEQDELEP LTWAGFKNGS KLTGAQAMWG
WQQLRLMNRQ VLSVFEDVDV YLCPVLGQLQ PEIGHLGPDQ EPRELNKKQG QVFPFTPPFN
FTGQPSLSLP LWQSENGLPI GMMFTGRYAD EATLFRLAAQ LEKELPWSGR KPKVWN
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