| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3041 |
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| Symbol | |
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| ID | 5455434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3240823 |
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| End bp | 3242265 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878629 |
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| Product | gid protein |
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| Protein accession | YP_001414305 |
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| Protein GI | 154253481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAGT TCCGCGTTAC AAAGCGCTCC ATGACAAAAG ACATCAAACC AGTTCACGTG
ATCGGTGCCG GCATGGCCGG CTCCGAGGCC GCATGGCAGC TCGCGCAGGC GGGCGTACCC
GTGGTGCTGC ACGAGATGCG GCCCTTGGTG AAGACGGACG CGCACCACAC GGACGGCTTC
GCCGAACTCG TCTGCTCGAA CTCGTTCCGC TCCGACGATC ACGAGCTGAA CGCCGTCGGA
TTGCTGCATG AAGAGATGCG GCGCGCGGGC TCGCTGCTGA TGGAAGCCGC CGCCGTTGCA
CGCGTGCCGG CAGGCGGCGC GCTCGCCGTC GACCGCGACA ATTTCTCGAA TTACGTGACG
GAGAAACTGA CGGCGCATCC GCTGGTGACA GTGGAGCGCG GCGAGATCGA CGGGTTGCCG
CCCGCGGATT GGGACAATGC GATCATCGCG ACAGGGCCCC TCACCTCCGA CGCCCTGGGC
AAGGCCATCG GCGAACTGAC CGGCGCGGAC GAACTCGCCT TTTTCGACGC CATCGCCCCC
ATCGTCTACC GCGACAGCAT CGACATGTCG GTGTGCTGGT TCCAGTCGCG CTACGACAAG
GAGAGCGCGG GCAGCACGGC GGGTGCAGGC GGCGCCGGCA AGGACTACAT CAACTGCCCG
ATGACGCGCG AGCAATACGA AGCCTTCATC GACGCGCTGC TGACCGGCGA CAAGACCGAA
TTCAAGGAAT GGGAAAAGGA CACGCCCTAT TTCGACGGTT GCCTGCCCAT CGAGGTGATG
GCGGAACGCG GGCCCGAGAC GTTGCGCTTC GGACCGATGA AGCCGGTGGG TCTCACCAAT
CCTCATGCGC CGGACGTGAA GGCCTATGCG ATCGTGCAGC TTCGCCAGGA CAACGCGCTC
GGCACGCTCT ACAACATGGT CGGCTTCCAG ACCAAGCTGA AGCATGGCGA ACAGACGCGC
GTCTTCCGCA CCATTCCGGG CCTCGAAAAA GCGGAGTTCG CGCGGCTTGG CGGGCTGCAC
CGCAACACAT TCATCAACAG CCCGAAACTG CTCGATCCCG TCATGCGGCT CGCGAAGGAA
CCGCGCCTGC GTTTTGCCGG ACAGATCACC GGCGTAGAGG GTTATGTCGA GAGCGGCGCC
ATGGGCCTGC TCGCCGGGCG CTTCGCCGCG GCGGAACGGC TTGGCCGCCT GCCGCAGACG
CCGCCGCGCA CGACGGCATT GGGCGCCCTC CTCGCCCACA TCACCGGCGA CGCGGACGCA
ACCACCTTCC AGCCGATGAA TGTGAACTTT GGCCTCTTCC CGCCTCCCGA AGTACCGCTC
GACGAGAACG GCAAGCGCCC AAGGGGCAAA GCCAAAGCCC CGGCACGGAA ACGTGCCTAT
ACGTCGCGCG CGCTGGCGGA CCTCGAAGCC TGGCTGCGGC CGAGGGCGGA AGCGGCCGAA
TAG
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| Protein sequence | MAQFRVTKRS MTKDIKPVHV IGAGMAGSEA AWQLAQAGVP VVLHEMRPLV KTDAHHTDGF
AELVCSNSFR SDDHELNAVG LLHEEMRRAG SLLMEAAAVA RVPAGGALAV DRDNFSNYVT
EKLTAHPLVT VERGEIDGLP PADWDNAIIA TGPLTSDALG KAIGELTGAD ELAFFDAIAP
IVYRDSIDMS VCWFQSRYDK ESAGSTAGAG GAGKDYINCP MTREQYEAFI DALLTGDKTE
FKEWEKDTPY FDGCLPIEVM AERGPETLRF GPMKPVGLTN PHAPDVKAYA IVQLRQDNAL
GTLYNMVGFQ TKLKHGEQTR VFRTIPGLEK AEFARLGGLH RNTFINSPKL LDPVMRLAKE
PRLRFAGQIT GVEGYVESGA MGLLAGRFAA AERLGRLPQT PPRTTALGAL LAHITGDADA
TTFQPMNVNF GLFPPPEVPL DENGKRPRGK AKAPARKRAY TSRALADLEA WLRPRAEAAE
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