| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3033 |
|---|
| Symbol | |
|---|
| ID | 5455986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3233728 |
|---|
| End bp | 3234714 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640878621 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001414297 |
|---|
| Protein GI | 154253473 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGC ACGATCATAT GCGGCGAATG GGGAGATGGG CGGGCGTACT TGCGCTCGCT
CTTTTCGTCG CCGCTTGCGG CAGCCGCGAG CGTCCCTGGT GGGATGGCGG CCCTTCCGGG
GCGCAATCGG GCTCCTCCGC CGCCGCGCCG CGGCCGATCG AACGGGTGTC TCCCGGCGGC
ACCTATGTCG TGAAGCGCGG TGACACGGTC TACAGCATCG CCCGCGCGCA TGACGTGCCG
CTTCGCTCCA TCATCGACAC GAACGGCCTG AGACCGCCTT ATGATATTCG CGTGGGGCAG
AAGCTCAGCA TACCCGCGGG CCGCTTCCAC GTCGTGCAAC GCGGTGAGAC TGTCTACAGC
ATTTCCCGCC TTTACAATGT CGACACGACA TCGCTGACGA GCCTGAACCG CATTCAGCCG
CCCTATACGA TCAAGGTGGG CGAAAAGCTG CAGGTGCCGT CGCGTGCCAC TCAGACGGCT
GCATCGCCTT CGGGCGCCGG TACGCCGCTT GCCCGTCCGG GCGCTGTTGC GGCGCCATCA
TCCGCGCCTG CAACCACGAC AACTGCCGTG ACGGTTCCGA AGTCGCCGCT ACCGGAGCCG
CCGGCCGCAA CGGGCAGCTT CGAATGGCCG GTTCAAGGGA AAATCCTCTC GAGCTTCGGG
CCGAAAGCCA ACGGGCTTCA TAATGACGGC GTCAATATCG CCGCAGAGAC TGGGGCGCCC
GTCAAGGCGT CGCAAAGCGG CGTCGTTGCC TATGCGGGCA ATGAGCTCAA GGGCTATGGC
AATCTCCTGC TCGTCCGGCA CGAGAATGAC TGGATCACGG CTTATGCCCA TAACAGCAAG
CTGCTCGTGC AGCGGGGCGA CAAGGTCGTG CGCGGCCAGA CGATCTCGCT CGCTGGCAAC
AGCGGCAGCG TGGTTACGCC CCAGGTTCAT TTTGAAGTGC GAAAGGGCTC GAAAGCGCTA
GATCCGCTGA CCGTAATCGG CCGCTAG
|
|---|
| Protein sequence | MRRHDHMRRM GRWAGVLALA LFVAACGSRE RPWWDGGPSG AQSGSSAAAP RPIERVSPGG
TYVVKRGDTV YSIARAHDVP LRSIIDTNGL RPPYDIRVGQ KLSIPAGRFH VVQRGETVYS
ISRLYNVDTT SLTSLNRIQP PYTIKVGEKL QVPSRATQTA ASPSGAGTPL ARPGAVAAPS
SAPATTTTAV TVPKSPLPEP PAATGSFEWP VQGKILSSFG PKANGLHNDG VNIAAETGAP
VKASQSGVVA YAGNELKGYG NLLLVRHEND WITAYAHNSK LLVQRGDKVV RGQTISLAGN
SGSVVTPQVH FEVRKGSKAL DPLTVIGR
|
|---|
| |