| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3030 |
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| Symbol | |
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| ID | 5455915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3230885 |
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| End bp | 3232192 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878618 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001414294 |
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| Protein GI | 154253470 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.134958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA TCAAGGCCAT TCGCGACGAC GCTGGGGCAT TCGATGCCGG GCTTGCGAAA
CGCGGGCTCG CGCCGCAGGC CGCGCGCCTT ATCGAGATCG ACGAGCGCCG CCGCGCCATC
ATAACTTCCC TTCAGGAATT GCAGCAGCGC CGCAACGATG CCTCCAAGCA AATCGGCCAG
GCGAAGGCGA AGAAAGACGA CGCGCTGGCT CAAAGCCTGA TGGAAGAGGT GGCGAGCATC
AAAAGCGCCA TTCAGGAGGG CGAGGAGAAG GAACGCGCCG CCAATGCCGA GATTGAAGCG
GCGCTGGCCT CCATTCCCAA TATTCCCTTC GACGATGTTC CTGTCGGTCC CGATGAGAGC
GCCAATGTCA TCCGCCACAG CCATGGCAAG GCGCGTGAGA TGAACTTCGC GCCGAAAGAG
CATTTCGATC TCGGCGAGGC CCTGGGCCTG ATGGATTTCG AGGCGGCTGC GAAGATGTCC
GGCGCGCGGT TCACAGTGCT CAAGGGCCAG CTCGCGCGGC TCGAACGCGC CATCGGCAAT
TTCATGGTGG ATCTCCACAC GACCGAGTTC GGCTATGAGG AAGTCGCGCC GCCCCTGATG
GTGCGCGACG ACGCCATGTT CGGCACCGCA CAGCTTCCGA AGTTCGAGGA CGACCAGTTC
GCGACATTCA AAGGTCTGGC GCGTGACGAT CAGGAAAAAT ACTGGCTGAT CCCGACAGCC
GAAGTGCCGC TGACCAATCT CGTGCGCGAG AGCATCCTCT CCGAAGAGGA GCTGCCGAAA
CGGTTTACCG CTTACACAGC CTGTTTCCGC GCCGAGGCTG GATCCGCCGG GCGCGATACG
CGCGGCATGA TCCGCCAGCA TCAGTTTTCC AAGGTTGAAC TCGTCTCGAT CACGACGCCG
GAGAAGTCAC GCGAGGAACA CGAGCGGATG CTCTCCTGCG CCGAAGAGGT GCTGAAGCGG
CTCGATCTGC ATTATCGCGT CATGACGCTG TCCACCGGCG ACATGGGGTT TGCCTCGCGC
AAGACCTATG ACATCGAGGT CTGGCTGCCG GGGCAGAACG CCTTCCGGGA AATTTCGTCC
TGTTCCGTCT GCGGCGACTT CCAGGCGCGG CGGATGAATG CGCGCTACCG GCCCAAGGGC
GAGAAGAACA CGCGCTTCGT GCATACGTTG AACGGATCCG GCCTTGCCGT CGGGCGCGCG
CTTGTGGCGG TGATGGAGAA TTACCAGCAG GCCGATGGCT CCATCACTGT TCCCACGGCG
CTCCAACCCT ATATGGGCGG GCAGGAGGTT ATCGCCGTTC ATGGCTAA
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| Protein sequence | MFDIKAIRDD AGAFDAGLAK RGLAPQAARL IEIDERRRAI ITSLQELQQR RNDASKQIGQ
AKAKKDDALA QSLMEEVASI KSAIQEGEEK ERAANAEIEA ALASIPNIPF DDVPVGPDES
ANVIRHSHGK AREMNFAPKE HFDLGEALGL MDFEAAAKMS GARFTVLKGQ LARLERAIGN
FMVDLHTTEF GYEEVAPPLM VRDDAMFGTA QLPKFEDDQF ATFKGLARDD QEKYWLIPTA
EVPLTNLVRE SILSEEELPK RFTAYTACFR AEAGSAGRDT RGMIRQHQFS KVELVSITTP
EKSREEHERM LSCAEEVLKR LDLHYRVMTL STGDMGFASR KTYDIEVWLP GQNAFREISS
CSVCGDFQAR RMNARYRPKG EKNTRFVHTL NGSGLAVGRA LVAVMENYQQ ADGSITVPTA
LQPYMGGQEV IAVHG
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