Gene Plav_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3020 
Symbol 
ID5456134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3221774 
End bp3222124 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content57% 
IMG OID640878608 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_001414284 
Protein GI154253460 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.494051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATA CCGCCACTAT CGAACCGACG ACCATTACCG TGACCGACAA CGCCGCGAAA 
CGGATCGCCC GCATCCTCGA GGGTGAAGGC GAAGGCGTGA TGTTGCGCGT GGCTGTGCAA
GGCGGCGGCT GCTCCGGTTT CCAATATGGC TTCACACTGG ATGACCTGCA GAACGACGAC
GATCTGGTTA TCGAAAAAAA CGGCGTGAAG GTTCTGATCG ATTCCGTCTC CGTCGAATAT
CTGGCCGGAT CGGAAATCGA CTTCGTGGAC GACCTGATCG GTTCGGCATT CAAGATCAAT
AATCCCAATG CCACAGCAGC CTGCGGCTGC GGCACGTCGT TCTCCGTTTA G
 
Protein sequence
MTDTATIEPT TITVTDNAAK RIARILEGEG EGVMLRVAVQ GGGCSGFQYG FTLDDLQNDD 
DLVIEKNGVK VLIDSVSVEY LAGSEIDFVD DLIGSAFKIN NPNATAACGC GTSFSV