Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3003 |
Symbol | |
ID | 5456247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3204050 |
End bp | 3204712 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878591 |
Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
Protein accession | YP_001414267 |
Protein GI | 154253443 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.704493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT TTGCCGCCGC CCGTCACAAC ATGGTCGAAA GCCAGGTGCG CATCAATTCG GTGACGGACC GGCGCGTGAT CGACGCCCTG TCGGCGATCC CGCGCGAGCG TTTCGTTCCG CAATCGAGCC AGGGCATCGC CTATATGGAC GAGGACGTCC GTATCGCCGG CGGCAAGCCG CCGCGTTTCC TGATGGAACC GCGTGTTTTC GCGAAGATGG TGCAGCTCGC GGAAATCGGC CCGGAAGACC TGGTGCTCGA TGTCGGCTGC GGCACGGGCT ATTCGACGGC GGTTCTCGCG CGCCTTGCCG GTACTGTCGT CGCTCTCGAA TGCGACGAAA ACCTCGCCGC CAGTGCTGGC GCCACGCTGT CCGATCTCGG TGTCGACAAT GCGGCGGTCC TGCCCGGTGC GCTTACGGAA GGTTGCGCGA AGCAGGCGCC CTACGATGTC ATCTTCATCA ACGGCATGAT CGGTTCGGTG CCGGATGCAT TGCAGAACCA GCTGCGCGAC GGGGGCCGTC TCGTTGCCGT TGTCGGCGAC GGCATTTCCG GCCGCGCTCG GCTCTATGTC CGCTCGGGCG AAACCTTCAG CGGACGCGAT GCCTTCGACG CCAATATCGG CTTCCTGCCC GGGTTCGAGC CGGTCGAGAG CTTTGTTTTC TGA
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Protein sequence | MTDFAAARHN MVESQVRINS VTDRRVIDAL SAIPRERFVP QSSQGIAYMD EDVRIAGGKP PRFLMEPRVF AKMVQLAEIG PEDLVLDVGC GTGYSTAVLA RLAGTVVALE CDENLAASAG ATLSDLGVDN AAVLPGALTE GCAKQAPYDV IFINGMIGSV PDALQNQLRD GGRLVAVVGD GISGRARLYV RSGETFSGRD AFDANIGFLP GFEPVESFVF
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