| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3001 |
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| Symbol | |
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| ID | 5456233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3201190 |
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| End bp | 3202410 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878588 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001414265 |
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| Protein GI | 154253441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.469537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTC CCGCGCATAG CGAAAATCCG CACGCCGTGC GCAAGGTGCT GCATGTGATG
CGCCTGCCGA TGGGCGGGCT CTTCCGTCAT GTGCGGGATC TGGTGGCCGG ACAGCAGGCC
GCGGGCATCG CGGCGGGCGT CATCTGCGCG GAACCGCCGG CGGATGATGG CGTCTCCGCG
AGGCGGCTTG CCGAGCTTGC GCCGAAATGC GGCCTCGGTC TCCATGTCAT ACCGATGGGG
CGGCTGCCGG GCGTCGGCGA TGCCGTCAAT ATTCGTGAAG TTCGGGCGCT GGCCGATTGG
CTGAAGCCCG ATGTTCTTCA TGGCCACGGC GCCAAGGGCG GTATGCTTGC GCGCCTTGCG
CCGCGCGACG GCGCCCGCGT CGTCCGTGTC TATACGCCTC ATGGCGGTTC GCTGCACTAC
AATGCATTGA GCCCGCAGGG CTTCGTCTAT CACACGGCCG AACGCCTGAT GCGCCGCCGC
ACGGATGGTC TCATCTTCGA ATCCGAATTC AGCCGCGCCG CCTATCTCGC CAAGATCGGC
CGTCCGGGTG CGCCTACCGC CGTCATTCAC AACGGGCTGA CGGAAGACGA ATTCCTGCCG
GTGCCTCATG GCGACATGGC TGCCGACTTT CTCTTCATCG GCGAACTTCG GATGCTGAAG
GGCGTCTCCA CACTGATCGA AGCTGCTTCG ACATTTTCGC GCCCGGTGCA TATCCGTATC
GTGGGCGCGG GGCCGGACCG CGCGCGTTTC GAGGAATTGG CGAAGACCGC CGGCTCCGCC
GCCCGGTTCG AGTTCATGGG CGCGATGCCG GCGCGCGAAG CTTTCAGGCT CGGCCGCATT
GCGGTCATGC CGTCCTGGAA TGAATCGCTT CCCTATGTCG CGCTCGAAAC CGCCGCTGCC
GGTATCCCGC TCATCGCGAC GCGTGTCGGC GGCATGGCGG AAATCTTCGG CCCGGATGCG
ACACGTCTCG TACCTGCGCA AAACGCTTCG GCGCTTGCCG CCGCCATGAT GGCTGCCCTT
GCCGATCCCG AAGCGGCTGC AGCTTCCGCC GCTCGTCTGC GCGCACGCGT CATGACGCAT
TTTTCGGCGA GCCAGATGGT CGAGGGTGTG AACGGATTTT ACGACCGCCT GCTCGAAGCG
CGGAAGGCGC GGCTTCTCGC GCATACCGGG CGTTTGGCAG CAGCGCCTGT CGCGCCGGGC
CTCACGGGTG CGGGGCAATA G
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| Protein sequence | MASPAHSENP HAVRKVLHVM RLPMGGLFRH VRDLVAGQQA AGIAAGVICA EPPADDGVSA
RRLAELAPKC GLGLHVIPMG RLPGVGDAVN IREVRALADW LKPDVLHGHG AKGGMLARLA
PRDGARVVRV YTPHGGSLHY NALSPQGFVY HTAERLMRRR TDGLIFESEF SRAAYLAKIG
RPGAPTAVIH NGLTEDEFLP VPHGDMAADF LFIGELRMLK GVSTLIEAAS TFSRPVHIRI
VGAGPDRARF EELAKTAGSA ARFEFMGAMP AREAFRLGRI AVMPSWNESL PYVALETAAA
GIPLIATRVG GMAEIFGPDA TRLVPAQNAS ALAAAMMAAL ADPEAAAASA ARLRARVMTH
FSASQMVEGV NGFYDRLLEA RKARLLAHTG RLAAAPVAPG LTGAGQ
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