Gene Plav_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2999 
Symbol 
ID5456379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3198146 
End bp3200362 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content65% 
IMG OID640878586 
Productnon-specific protein-tyrosine kinase 
Protein accessionYP_001414263 
Protein GI154253439 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.821913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.521922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CTCCTATCAG TCCCGTAGTC TCATTCGGCG ACCGGCGCAG AGCGGCGCCG 
GATGAAAACG CCGTGGGCGA CATTTCGCCA TGGGAAGTGC TGCGCGGCGT CTGGGCCCGC
AAGGAGATCA TCGCCTGTAC CTTCGTGGCT TTCATGGCCG TCGCGATCTT CTGGCTGATG
ACGGTCGTGC CGACCTACAC AGTCGAGACA CGCATCATGC TGTCGCCACG CGCTGGCGAA
ATCTCGACAT TCGACGCGGA CAGCACGCCA TCGCTGCCCG ACAACGAGAC CCTTCAAAGC
GAAATTCAGG TACTGACGTC GCGGCCTCTG GCAGCGCGGC TGATTACCGA TCTCGGACTG
GCAGCTCATC CCGAGTTCAA TCCGGCCTTG CGGGCGCCGG GCTTCCTCGG CCGTATTGCG
GTGGCCTTCG GCCTCCGGGA CCGGCAGCAG CCCACCGACA TCGAGGAAAT CACGGATGTC
GTGCTCTCGC GGCTCGAGGT CTTCCAGAAG ATCAATTCAC GCGTGATCGC GATCGTCTTC
ACCTCCGCCG ATCCGCGCAT GGCCGCCATC GTACCGAACC GTCTGGCGGA GCTTTACATC
GCGCAACAAG TGGAACAGAA AGCCGGCGTC AACAGCGAGG CCGCCAGGTG GCTCGCCAGC
CAGATCGCGG AACTGCGCGT CAAGGTGCAA GCCTCGGAAG CGGCCGTGGA AGCGTTCCGG
GCCAAGTCCG GCCTCTTCCT GACAAACGGC TCGACCTTGC CGCAACAGCA GTTGACCGAC
CTCAACAGCC AGCTCTCGGT CGCCGAGGCA GACCGCGCCG CCGCACAGGC CAAGCTCTCC
AATGCGCGCT CCCTTCTCGC CTCCGGGAAT GCGGTCAACT CCGCCGCGGA AGTATTGCAG
TCGCCGCTGA TCCAGAACCT GCGCCAGCAG GAAGTCGCGC TGCGGGCGCA GATCGCCCAG
ATGTCCGAGA CGTTGCTGCC GACGCATCCG CGCATGCAGG AAAGCCAGGC AAACCTGGAC
GACCTCGGCA GGCAGATCGA AAAGGAAGTC CACAAGGTCA TCGACGCGCT GGAAAACGAG
GCCCGCGTGG CCGGGGCGCG CGTCAATTCG TTGCGCGACA GCCTTAATCG CCTTCAGCGC
CGAATGGGCG AGGTGAACCA GGATGAAGTG AAGCTGCGCG CCCTGCAGCG CGACGCCGAC
ACCAACCGGT CACTTCTCGA GTCCTTTCTC CGCCGCTACG AAGAGGCCAA TGCCCGCGCC
GAAGCGGACA GCAAGGCAGC GAATGCACGC ATCGTTTCCC GCGCACAGCA GCCGAGCGAG
CCGACATTTC CGCGCACGGG CGCCGCGCTG ACACTCGCCA CCATCGCCGG GCTCATCTTC
TCGTTCCTCG TTGCCTTCCT CCTTGAAGCC TTCTCACGCG GCTTCCGCGC CGGCGACCAG
ATCGAGCGGG CGACCGGCAT GCCTTTCCTC GGACTCGTGC CGGAACTTGA AACGCAGAAA
GGCAGCGTCT ATCCGGCTCT CGACATCGTG CGCGATCCGG CCGGGCTCTA TGCCGAAGCC
ATCCGTGCCC TGCAAGGACA CGTGCTGCTG GCTCGCGTCG GCGACCGCCG CGCGCGCACC
GTTCTCGTCA CATCCGCCAT CGCAGGCGAA GGCAAGACGG CGACGGCGGC AAGTCTTGCC
CGCGTCTTTG CGATGGGGGG CTATCGCACC GTCATCATAG ATGCCGATCT TCGCGATCCC
TCGCTTCATG AAGCACTCGG CGCTCGGCGG CAGCCTGGCC TTGCGGACCT CCTTGTCGGC
CGCGCTGCCT TCCAGCACGT GATCCGGCAG GACAATGCAA GCTATGCGCA TGTCATCCAG
GCGGGCACGC CGGTGCCGAA CCCGACGGCG GCCCTTGCCT CATCGCAGAT GCTCTGGGTA
TTGAACGCGC TTCAGCAGAC CTATGACTAC ATCATCATCG ACTCACCCGC CGCGATGGCG
ACCGCCGACG CGCAGGTGCT GGCGAAGATT ACCGACGTGA CGGTGTTGGT GGTGAAGTGG
TCGTCGACCA ACCGGCGCAT CGTGGCCCGC GCGCTGAAGC TGCTGTCGGC AGCGAGCAGC
CGCCGCGTCG GCCTTCTGCT GACACGGGTC AATCTCAAGC GGTATCGCCG CTACGCCACC
GACGGTCTCA ACGAATATCC GCCTCATACC TCGCGGCCGG CAATCGCCGC CCGCTAA
 
Protein sequence
MTDTPISPVV SFGDRRRAAP DENAVGDISP WEVLRGVWAR KEIIACTFVA FMAVAIFWLM 
TVVPTYTVET RIMLSPRAGE ISTFDADSTP SLPDNETLQS EIQVLTSRPL AARLITDLGL
AAHPEFNPAL RAPGFLGRIA VAFGLRDRQQ PTDIEEITDV VLSRLEVFQK INSRVIAIVF
TSADPRMAAI VPNRLAELYI AQQVEQKAGV NSEAARWLAS QIAELRVKVQ ASEAAVEAFR
AKSGLFLTNG STLPQQQLTD LNSQLSVAEA DRAAAQAKLS NARSLLASGN AVNSAAEVLQ
SPLIQNLRQQ EVALRAQIAQ MSETLLPTHP RMQESQANLD DLGRQIEKEV HKVIDALENE
ARVAGARVNS LRDSLNRLQR RMGEVNQDEV KLRALQRDAD TNRSLLESFL RRYEEANARA
EADSKAANAR IVSRAQQPSE PTFPRTGAAL TLATIAGLIF SFLVAFLLEA FSRGFRAGDQ
IERATGMPFL GLVPELETQK GSVYPALDIV RDPAGLYAEA IRALQGHVLL ARVGDRRART
VLVTSAIAGE GKTATAASLA RVFAMGGYRT VIIDADLRDP SLHEALGARR QPGLADLLVG
RAAFQHVIRQ DNASYAHVIQ AGTPVPNPTA ALASSQMLWV LNALQQTYDY IIIDSPAAMA
TADAQVLAKI TDVTVLVVKW SSTNRRIVAR ALKLLSAASS RRVGLLLTRV NLKRYRRYAT
DGLNEYPPHT SRPAIAAR