| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2993 |
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| Symbol | |
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| ID | 5456438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3189590 |
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| End bp | 3191491 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878579 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001414257 |
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| Protein GI | 154253433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.768661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.830913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTC ATTCCAGGGC CACAGATGGT AGTTTCGCGG CGCGAGATGT TTCCTCTACC
GAGTCGCCAA TGCCCAGCCC CATAAATACC GCGGATAAGC CGCTGCCTCA CCCGGAGGAG
GTGCTGAAGT CGATATTCGG CCTTCCCTCG TTTCGCGGCG AGCAGGCCGA GATCATCCGC
CATGTGGTCG ATGGCGGTGA CGCCGTGGTC CTGTTACCGA CAGGGGCCGG CAAATCATTG
TGCTACCAGA TACCGGCGCT CTGTCGCGAG GGGGTGGCGG TTGTGGTGTC GCCGCTCATA
GCGTTGATGC GCGATCAGGT GGAGGCGCTC CGTCAGTCCG GCGTCCGAGC GGCGGCGCTC
AACTCCACAT TGACGCAGGA AGAAGCGCGC GACATTCGCG AGGCGCTGAC GGCAGGCGAA
CTCGACCTTC TCTATGTAAC GCCGGAGCGG CTTGCAAGCG ACGGTTTCAT AAGCTTCCTC
GCGCGCGTGC CCCTGGCGCT CTTCGCCATC GACGAAGCAC ATTGCATCAG CCAGTGGGGG
CATGACTTCC GTCCAGAATA TCTGCAGTTG GGACGGCTCA AGGAGCGTTT CCCCGATGTG
CCGCGCCTTG CGCTTACGGC AACGGCCGAT CCGCAAACGC GCGACGATCT GGTTCACCGC
TTGCAGCTTG ATGATGCCCG GATTTTTTCA GCGAGCTTCG ACCGCCCGAA TATCCGCTAC
ACGATCGTCC GCAAGGACAA CGCAAAAAGC CAGTTGCGCG ATTTTCTGAA GGCACATGAA
GGCGCGAGCG GCATCGTCTA TTGCCTCAGC CGCAAGAAAG TCGAGGAAAC CGCCGATTGG
CTGACTGCGC AGGGCATTCT TGCGCTGCCT TATCACGCGG GGCTCGATCG CAGCATTCGT
GACAAGCATC AGGATGCCTT TCTAAAGGAT GAGGGGCCTG TACTCGTCGC CACCATCGCG
TTCGGTATGG GCATCGATAA ACCCGATGTA CGCTTCGTCG CGCATCTCGA CCTGCCGTCA
AGCATCGAGG CCTATTATCA GGAAACGGGC CGGGCAGGGC GCGATGGATT GCCATCGGAT
GCGTGGATGG CATGGGGCAT GAGCGACGTC TCGCTCAGGC GCCGCATGAT CGACGAAGGC
GCATCGCCGG AATTGGTGAA ACAGGTAGAA CGCACCAAAC TCGACGCCCT GCTTCATGTC
TGCGAGACGG CCACATGCCG GCGCCAGGCG CTGCTCGCCC ATTTCGGTGA GAGCCATGCA
GGCGCTTGCG GCAATTGCGA CGCATGTCTT ACGCCCGCCG AAATGTGGGA TGGAACCGAA
GCGGCGCGCA AGGCTCTTTC CGCGATCTAC CGGACAGGCC AGCGTTTCGG CGCAGGGCAT
CTCATCGACA TTTTGCGTGG CAACAAGACG GAGAAGGTCG AACGCAGCCA GCATGATGAT
CTGCCGACTT TCGGGGTTGG AAAAGACCTC GATCAGAAGA GCTGGCAATC CGTCTTCAGG
CAGCTCGCCG CGCGCGGCAT CATTTCAATC GACCACACCG CCTATGGCGC GCTGAAGCTT
GAGGAAAGTG CGCGGCCGGT ATTGCAGGGT CAGCAGCCGG TTGAGCTTCG CCGCGACCCG
GTCTCGAAGC GGCGGCAAAG AGCTGCTGCG GCGGCGTCGA CCGACCCCTT GGCCTACCCC
GAGGAGGAAG CGCTTTTCCA GGCGCTGCGC GCGGAGCGTT TGCGGCTCGC CCGCGAGCAG
GGCGTCCCGC CCTACGTGAT CTTCCACGAC ACTTCGCTTC GGGAAATGGC ACGGCGTCGG
CCTGCCAGTG TCGAGGACAT GACAGACATC CCCGGCGTCG GCGGCGCCAA GATCGCCCGC
TATGGCGAAG CCTTCCTCGC GGTGGTGGCG GAGGTGGCTT AG
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| Protein sequence | MRVHSRATDG SFAARDVSST ESPMPSPINT ADKPLPHPEE VLKSIFGLPS FRGEQAEIIR
HVVDGGDAVV LLPTGAGKSL CYQIPALCRE GVAVVVSPLI ALMRDQVEAL RQSGVRAAAL
NSTLTQEEAR DIREALTAGE LDLLYVTPER LASDGFISFL ARVPLALFAI DEAHCISQWG
HDFRPEYLQL GRLKERFPDV PRLALTATAD PQTRDDLVHR LQLDDARIFS ASFDRPNIRY
TIVRKDNAKS QLRDFLKAHE GASGIVYCLS RKKVEETADW LTAQGILALP YHAGLDRSIR
DKHQDAFLKD EGPVLVATIA FGMGIDKPDV RFVAHLDLPS SIEAYYQETG RAGRDGLPSD
AWMAWGMSDV SLRRRMIDEG ASPELVKQVE RTKLDALLHV CETATCRRQA LLAHFGESHA
GACGNCDACL TPAEMWDGTE AARKALSAIY RTGQRFGAGH LIDILRGNKT EKVERSQHDD
LPTFGVGKDL DQKSWQSVFR QLAARGIISI DHTAYGALKL EESARPVLQG QQPVELRRDP
VSKRRQRAAA AASTDPLAYP EEEALFQALR AERLRLAREQ GVPPYVIFHD TSLREMARRR
PASVEDMTDI PGVGGAKIAR YGEAFLAVVA EVA
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