Gene Plav_2991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2991 
Symbol 
ID5456456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3187560 
End bp3188174 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content64% 
IMG OID640878577 
ProductNUDIX hydrolase 
Protein accessionYP_001414255 
Protein GI154253431 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.499993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGC CTCTTGTTCC CACGCCGCGG ACGCTTGCCG ACATCGAAAT CCGCTCGCGC 
GACATCGTCG GCCGCGGTTG GGGCAAGCTG GAGCGTTTCG TGTTCCGGCA TCGCCGCTTC
GATGGCGGCT GGTCGGACGA GGTCACCCGC GACATCTACA CCATCGGGCG GGTGGCGATG
GTCCTTCCCT ACGATCCGGC GCTGGACGCG GTATTGCTGA TCGAGCAGTT CCGCACCTGC
GGCCTCGTCT GGGGCGAGGC GACCTGGCTC TTCGAGGCGG TGGCGGGCAT CGTGGACGAG
GGAGAGACAC CGCCCGAGGT GGCCGCACGC GAAGCCTGGG AGGAGGCCGG TTGCCGGATC
GGCGAACCCG TTCCTATCTC GACCGTCTGG TCCTCGCCTG GCGGCTATGG CGAGCGGAGC
TGGCTCTATA CGGCGAAGAC CGACCTCGCC GGCATTGGCG GCATTCACGG CCTCGCCGAC
GAACATGAGG ATATACGGGC TGTCGTCGTC GGACTTGATG AGGCTCAAGC GGCGATTGCC
GACGGACGCA TTCAGGACGC AAAAACTATC CTTATGATTC AATGGCTTGT GCTGAACAAG
TCCAGCATCG GTTGA
 
Protein sequence
MKSPLVPTPR TLADIEIRSR DIVGRGWGKL ERFVFRHRRF DGGWSDEVTR DIYTIGRVAM 
VLPYDPALDA VLLIEQFRTC GLVWGEATWL FEAVAGIVDE GETPPEVAAR EAWEEAGCRI
GEPVPISTVW SSPGGYGERS WLYTAKTDLA GIGGIHGLAD EHEDIRAVVV GLDEAQAAIA
DGRIQDAKTI LMIQWLVLNK SSIG