| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2986 |
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| Symbol | |
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| ID | 5456486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3183148 |
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| End bp | 3184257 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878572 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001414250 |
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| Protein GI | 154253426 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.794421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.698429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATGG AAGATGTCAC CGGCCGGCCG GCGCCACGAA GCAAGAGCCT GACGCCTCTC
GCGTGGGCCC AGCGCAATCT GTTTTCGAGC GTGGGAAATA CGATCCTGAC GCTCGCCTCG
TTTTATCTGC TCTGGCTGAC GATCCCACCG GCTCTCGACT TCACGATCTT CAGCGCTGTG
TGGACGGGGA CCACACGCGA GGCCTGCCTT GAACCAGGGG CGGGCGCCTG CTGGCCCTTC
GTATGGGCAA ATATCGATCA GTTCATCTAT GGCCGCTATC CGCCGTCGGA AATCTGGCGC
GTCAATCTTA CCTTCGCGCT TGGTGTGGCC GTCATCGTGC CGATGCTCAT TCCGGGGTTG
CCTGCGCGGC GGCTCAATCT TGTTCTTCTG CTGATCGTCT ATCCGCTTGT GGCGATCGTG
CTGCTGGCGG GCGACCGACC CGGTCTGCCG CCGGTCCCGA CGAGCGAATG GGGCGGGCTG
CTGGTCACGC TCGTAGTCGC CGTGACCGGT ATCGTTGCGT CGTTGCCGCT CGGCGTACTG
CTGGCGCTCG GGCGGCGCTC GGACATGCCG GCGATCCGGA TGCTCTGCAT TATCTTCATA
GAGTTTTGGC GCGGGGTGCC GCTCATCACC GTACTCTTCA TGGCGAGCGT GATGCTGCCG
CTCTTTCTGC CGGAAGGGGT TAACCCGGAC AACCTGCTGC GTTGTCTCGT AGGCGTGGCG
CTTTTTTCGT CTGCCTATAT GGCGGAAGTG GTGCGAGGCG GTTTGCAGGC GATCCCGGCC
GGACAATATG AAGCCGCACG AGCAGTCGGG CTCACTTATT GGCAGGCGAT GGGGCAGGTG
GTGTTGCCGC AGGCGCTGCG CCATGTCATT CCCGGCATCG TCAACACTTT CATCGGCCTC
TTCAAGGATA CGACGCTGGT GCTGATTGTC GGCATTTTCG ATTTGCTCGG TCAGGTGCGC
GCGCAGCTCA GCGATCCGAA CTGGACGATC CCGCAAGGCG CACTGACAGG CTATATCTTC
GCGGCCCTGG TCTTCTGGGT CTTCTGCTTC GGGATGTCGC AATATTCGAA CTTCATGGAA
CGGCGCCTCG ATACGACGCG CGAGCGCTAG
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| Protein sequence | MGMEDVTGRP APRSKSLTPL AWAQRNLFSS VGNTILTLAS FYLLWLTIPP ALDFTIFSAV
WTGTTREACL EPGAGACWPF VWANIDQFIY GRYPPSEIWR VNLTFALGVA VIVPMLIPGL
PARRLNLVLL LIVYPLVAIV LLAGDRPGLP PVPTSEWGGL LVTLVVAVTG IVASLPLGVL
LALGRRSDMP AIRMLCIIFI EFWRGVPLIT VLFMASVMLP LFLPEGVNPD NLLRCLVGVA
LFSSAYMAEV VRGGLQAIPA GQYEAARAVG LTYWQAMGQV VLPQALRHVI PGIVNTFIGL
FKDTTLVLIV GIFDLLGQVR AQLSDPNWTI PQGALTGYIF AALVFWVFCF GMSQYSNFME
RRLDTTRER
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