| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2984 |
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| Symbol | |
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| ID | 5456437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3180834 |
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| End bp | 3181937 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878570 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001414248 |
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| Protein GI | 154253424 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.47136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATC CCGTGGTCGC GCTCATCGTG GGCATCCTGA TCGGTGTCGG CGGCCTGTAT
TTCTTTTTGC CTTACGACCC GCTGACGCTG GGCAGGGGGT CTGCCGGTGC GGATGCTTCG
CTCCAGGCCG AGGATGGCGA ACGCATCGCG GCCGGGGACA CGCTGCGGCG GGTGCGGCAG
CGCGGTTTCA TTCAGTGCGG CGTGAGCCAG GGGCTGCCCG GCTTTTCAAA CCCTGATGAG
CGTGGGCGCT GGTCCGGTAT CGATGTGGAT TTCTGCCGGG CCATCGCGGC GGCGATTTTC
GGCAACCCCG ACCAGGTTCG CTTCCGGCCG CTTTCTGCGA AGGACCGTTT CACGGCGCTG
CAGTCGGGCG AGATCGATAT TCTGTCGCGC AACACGACAT GGACCATGTC GCGCGATACG
CAGCTCGGCT TTAACTTCGT CGGCGTGACC TACTACGACG GTCAATCCTT CATGGTGCGC
AAGGCTGCCG GGATAAAGAC GACGGCAGAT CTCGCCGGGG CGACGATCTG CACGGAAACG
GGCACGACGA CGGAACTCAA TCTTGCCGAT TATTTTCGCA GCCGCGGGCT CAGCTACCGG
GTTCTTTCTT TCGAGAAGAA CGACGAGGCG ATCGTTGCCT ATGATCGGGG GCGGTGCGAC
GCCTATACGA CCGATGCTTC CGGCCTTTAT GCCACACGGC TGAAGCTCGC CGACCCCGAC
GCCAACACAA TCCTTTCGGA GATTATCTCG AAGGAACCTC TTGGCCCCGC AGTGCGGCAG
GGCGATCCGC AATGGGAAGA TATTGCGCGC TGGACACTGA ATGCGCTGCT TGAGGCGGAA
GAATTCGGCA TCACGTCCGC GAATATCAAC GAAATGCTCG AGAGCGACAA TCCGCGCGTG
AAGCGGCTGC TTGGCCGGGA AGGGGCTTAT GGCGGCTCGG TCGGGCTCGA TGCCAACTGG
GCAGCAAATG CAATCCGGGC AGTCGGGAAC TACGGCGAGA TGTTTGAGCG CAATGTGGGC
AAGAATACGC CGCTTGGCAT TGAACGCGGA CTGAATGCGC AATGGACGGA TGGCGGGCTG
CAATATGCGC CGCCGGTGCG ATAA
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| Protein sequence | MKNPVVALIV GILIGVGGLY FFLPYDPLTL GRGSAGADAS LQAEDGERIA AGDTLRRVRQ
RGFIQCGVSQ GLPGFSNPDE RGRWSGIDVD FCRAIAAAIF GNPDQVRFRP LSAKDRFTAL
QSGEIDILSR NTTWTMSRDT QLGFNFVGVT YYDGQSFMVR KAAGIKTTAD LAGATICTET
GTTTELNLAD YFRSRGLSYR VLSFEKNDEA IVAYDRGRCD AYTTDASGLY ATRLKLADPD
ANTILSEIIS KEPLGPAVRQ GDPQWEDIAR WTLNALLEAE EFGITSANIN EMLESDNPRV
KRLLGREGAY GGSVGLDANW AANAIRAVGN YGEMFERNVG KNTPLGIERG LNAQWTDGGL
QYAPPVR
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