| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2983 |
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| Symbol | |
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| ID | 5456042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3179477 |
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| End bp | 3180634 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878569 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_001414247 |
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| Protein GI | 154253423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.475829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAA AGCAGGACAC GCTGATCGTG ACCGCAGGCC GCGATCCCGA AGCGAACTTC
GGTATCGTCA ATCCGCCGGT TTATCACGCT TCAACTGTGC TTTATCCGAC TCTCGAAGCT
GTGAAGACGC GCGCGCAGCC AGTCACCTAT GGGCGGCGCG GCACGCCTAC GACCTTTGCG
CTTCAGGACG CCATAGCCGA ACTTGAAGGC GGCTATCGCT CGCTGCTCAC GCCCTCCGGC
CTCGCCGCCG TCACCACCGC CTTGCTGGCT CATCTGAAGA GCGGCGATCA CCTGTTGATG
ACCGACAGCG TGTATGAACC CTCCCGCCAG TTCTGCGACA AGGTGCTGAC GCGCTATGGC
ATAGATGTCG AATATTACGA TCCCCGCATC GGCGCCGGCA TCGCCGCGCT TATCCGCCCC
GAGACGAAAG TGATATTCAC GGAAGCCCCC GGCTCCGTCA CATTCGAGGT GCAGGATATT
CCCGCCATCG CAGCTGCGGC TCATGGGGCG GATGCCCTGC TGATGATGGA CAATACCTGG
GCCTCACCGC TTTATTTCAA GCCGTTCGAG CATGGCGTCG ATGTCTCGAT CCAGGCGGTG
ACGAAGTATC TCTGCGGTCA CTCCGACGTG ATGATGGGCG CTATCACCAC CACCGAAGCA
GCCTGGAACG AAACGCTTGC GACGCATGGC GCGCTCGGTG TTTGCACGGG CCCTGATGAC
ATCTATCTCG TGCTGCGCGG CATACGCACA TTGTCGGTCC GCCTCGAACG GCACATGGAA
ACAGGCCTCA AACTGGCCCG CTGGCTTGCC GCACGGCCGG AAGTCACGCG GGTCATTCAC
CCTGCTCTGC CCGATCATCC CGACCACGCA ATCTGGAAGC GCGATTTCAC GGGCGCCAGC
GGCCTTTTTT CCATTGAACT CATCCCATGT TCCGAAGCGG CGCTCGCGGC ATTCCTCGAC
GGTCTTGAAC TGTTCGGCAT GGGTTATTCA TGGGGTGGCT TCGAGAGCCT GATCATTCCG
CAATATCCGG CGAAAATCCG CACCGCGACG AAGTGGAACG GTACCGGCCA AATACTACGC
CTTCATGCCG GGCTGGAAGA CGCGGACGAC CTGATTGCCG ATTTGGAAGC AGGCTTTGAA
CGCTTTCACA CCGCATGA
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| Protein sequence | MKKKQDTLIV TAGRDPEANF GIVNPPVYHA STVLYPTLEA VKTRAQPVTY GRRGTPTTFA
LQDAIAELEG GYRSLLTPSG LAAVTTALLA HLKSGDHLLM TDSVYEPSRQ FCDKVLTRYG
IDVEYYDPRI GAGIAALIRP ETKVIFTEAP GSVTFEVQDI PAIAAAAHGA DALLMMDNTW
ASPLYFKPFE HGVDVSIQAV TKYLCGHSDV MMGAITTTEA AWNETLATHG ALGVCTGPDD
IYLVLRGIRT LSVRLERHME TGLKLARWLA ARPEVTRVIH PALPDHPDHA IWKRDFTGAS
GLFSIELIPC SEAALAAFLD GLELFGMGYS WGGFESLIIP QYPAKIRTAT KWNGTGQILR
LHAGLEDADD LIADLEAGFE RFHTA
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