| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2980 |
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| Symbol | |
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| ID | 5456475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3177023 |
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| End bp | 3177787 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878566 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001414244 |
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| Protein GI | 154253420 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.296411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.456006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGATA TAGGAGACCG ATCTGCGGCC GCAATGGTGC CCGGACAGCG TTTTGACACT
CGTCTGTTCG GTGGGCTGTT TCTGCTGACG ATATTCATCA TTGCATTCAG TGCGGGCGCC
TGGGCGGCCG ACAAAGTTTT GGCGGATCCG ACCAAGCCCG ACCCGTCCAT CGAGGGGGCG
CCCAACGAGG AATCCGGTCA GGATCTCTAT ACGCGCGGCT TTTACCCGCA AGCGCTGGCC
GAGTGGAAAC GAGCCGTCGA ACAGAACAAG GATCCGGGGG CGGCGTTTCG GCTGGGTGAA
GAGCATTTCG ACGCGAAAGT CGTCGAGCGA GACGTAGAGA CCGCCATCAA ATATTACTTC
ATAGGCGCTC TTGGCGGTGA CAAGAGGGCG CAGATGGACC TTGCCTCCAT GTATGACAAG
GGCTGGGGCG TACCGCAGGA TTTGCAGAAG GCTGCCCAAT GGTATGAGGC GGCGGCGAAG
CAGGGACTTG AGAGTTCCCA GTATAATATC GCCACGATGT ACGAAGAGGG TGTGGGGGTC
GAGGCCGACA AGGTCAAGGC ATACCAATAT TATCAACTCG CCATCCAAGG CGGTTTCCCC
AAGTTTGCGA CAGAGGCAAT CGAAAATCTC GCGGAAAACA TGACGCCTGC CGAAATCAAG
AAGGCAAGCA TCATGGCTCG CGATTTCCAA CCGTTGACGC GCGAGCAAAG CGCGGCGGAA
GTTCAAAGCT TTGCTGAAGT CGAAAAAGCC GGTCGCGCCG AGTAA
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| Protein sequence | MRDIGDRSAA AMVPGQRFDT RLFGGLFLLT IFIIAFSAGA WAADKVLADP TKPDPSIEGA
PNEESGQDLY TRGFYPQALA EWKRAVEQNK DPGAAFRLGE EHFDAKVVER DVETAIKYYF
IGALGGDKRA QMDLASMYDK GWGVPQDLQK AAQWYEAAAK QGLESSQYNI ATMYEEGVGV
EADKVKAYQY YQLAIQGGFP KFATEAIENL AENMTPAEIK KASIMARDFQ PLTREQSAAE
VQSFAEVEKA GRAE
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