| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2978 |
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| Symbol | |
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| ID | 5456549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3175445 |
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| End bp | 3176368 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878564 |
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| Product | Ku domain-containing protein |
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| Protein accession | YP_001414242 |
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| Protein GI | 154253418 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1273] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.180009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.23611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC GCAGCACATC CACCCGCAGC GCCGCGGAAA AAAAAACGAC ACCCAGAAGC
AAGGCTCGAA AGAAGTCGCC CGCGGCGGCT ATCACGTCGG CTCGCGCCGC ATGGAGCGGG
AACATACGGC TGGCGCTCGT CTCGCTGCCG GTGAAAATTT TTCCCGCTAC AAAGACCGGT
GCGCGCATTG AATTTCATCA GATCCACGAG CCCTCGGGCA AACGTATCCG TTATCAGAAG
GTCGTGCCCG GCATAGGCCC TGTCGACATG GACGAAATCG TCAAGGGCTT CGAGTTGGAA
AAAGGCCATT ATGTCCTGCT GGAACAAGAC GAGATCGAAA ACCTGAAACT CGAAACCAAG
AGAACCCTCG ATCTCGTCCA GTTTGTTAAA CAGGGCGAAA TTGAGCCTTT GTGGTTCGAC
CGTCCTTACT ACGTCGTGCC CGACGACAAT CTGGCGGAAG AAGGCTACCG CGTTCTCCGC
GATGCATTGC GCGCCTCCGG CAAGGTAGGC ATCGGACAGT TCGTCATGCG GGGTCGCGAG
CATATCGCCA CATTGAAACC CTGCGGAAAT GGTCTCCTGC TCGAGACACT GCGCTTTTCC
GACGAAGTCC GAAGCGCCAC CCCCTACTTC ACGGCATCGG ACGACGAAGA GCCTGAGAAA
GAGCTGCTGT CTCTTGCCGA AGAGCTCATT GAGCGCAAGA CCGCGCCTTT CGAGCCGCGG
GAGTTCAAGG ATCAGTACAC TGAAGCCGTC CGTGAATTGA TAGATGCCAA GGCAAAGAAA
AAGAAACCAG TTGCAGTGGC AGAAGAAGAA GCACCAGGCG GCGCCGAAGT TATCGATCTT
GTCGAAGCGT TGAAGCGGTC TGTCAAAGGC GGCAGCAAGA CGGGATCGGC GAAGCGCGCG
CCAGCGAAGC GCAAGGCAGG TTAG
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| Protein sequence | MAKRSTSTRS AAEKKTTPRS KARKKSPAAA ITSARAAWSG NIRLALVSLP VKIFPATKTG
ARIEFHQIHE PSGKRIRYQK VVPGIGPVDM DEIVKGFELE KGHYVLLEQD EIENLKLETK
RTLDLVQFVK QGEIEPLWFD RPYYVVPDDN LAEEGYRVLR DALRASGKVG IGQFVMRGRE
HIATLKPCGN GLLLETLRFS DEVRSATPYF TASDDEEPEK ELLSLAEELI ERKTAPFEPR
EFKDQYTEAV RELIDAKAKK KKPVAVAEEE APGGAEVIDL VEALKRSVKG GSKTGSAKRA
PAKRKAG
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