Gene Plav_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2973 
Symbol 
ID5456564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3169971 
End bp3170444 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID640878557 
Productcation antiporter 
Protein accessionYP_001414237 
Protein GI154253413 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0727483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG CGGTTGGACT ACTGGTAGCG CTCTTCGCCC TCTGGCTGGC TTTATCGGGA 
TACTTCAAGC CATTACTGCT GACTCTCGGC GTACTTTCCT GCCTGTTTAC CGTCTTCCTC
GCATTCCGGA TGAAGTTGCT CGACGACGAG GCGGTGCCGA TTCAGCTGCG CCCGTCGCTG
CTGCTCTATT GGGGATGGCT TGGGGGCGAA ATCTTCAAAT CGGCGGTTGC CGTATGCCGG
ATCATTCTTT CCCGCGACAT GCCGGTCAGC CAAAATCTCG TTGCTGTCGA CTGTCCTCCT
AAAACGGAAA TGGGTCACGT CATTTTCGCC AATTCGATCA CGCTGACGCC CGGCACAATC
ACCGTCGAAG CCGGGAACGG CAAGTTTCTG GTCCAGTCCC TGACCGACGA AGGCGCCCGT
CCCGAGGGGT TTGCCGAGAT GGGTCGCCGT GTCGCCCATA TCGAGGGACG TTGA
 
Protein sequence
MAKAVGLLVA LFALWLALSG YFKPLLLTLG VLSCLFTVFL AFRMKLLDDE AVPIQLRPSL 
LLYWGWLGGE IFKSAVAVCR IILSRDMPVS QNLVAVDCPP KTEMGHVIFA NSITLTPGTI
TVEAGNGKFL VQSLTDEGAR PEGFAEMGRR VAHIEGR