Gene Plav_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2972 
Symbol 
ID5456650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3169682 
End bp3169969 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content53% 
IMG OID640878556 
Productmultiple resistance and pH regulation protein F 
Protein accessionYP_001414236 
Protein GI154253412 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2212] Multisubunit Na+/H+ antiporter, MnhF subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0676635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATGT TTCTCGCGGT TGCAGCGGCA CTTTTTGTCG CGATCCTGCT CGTCCTGATA 
AGGCTTTTTG CCGGGCCGAC GGTTTACGAT CGCGTACTGG CGGTCAACAC TTTCGGAACG
CTGACCGTGC TCTTCCTCAG CCTTCTCGGA TTCATCGGTG AACGTCCGGA TTTCCTCGAT
ATAGCCATCC TGTACGCACT CATCAATTTC GTCAGCACAA TCGCAATTCT CAAATTCTTC
CGCTATCGGG CCCTTGGCCA AGCGACGCTC AATACCGAGG ATTCGTGA
 
Protein sequence
MVMFLAVAAA LFVAILLVLI RLFAGPTVYD RVLAVNTFGT LTVLFLSLLG FIGERPDFLD 
IAILYALINF VSTIAILKFF RYRALGQATL NTEDS