| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2964 |
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| Symbol | |
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| ID | 5456200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3162828 |
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| End bp | 3164522 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878548 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001414228 |
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| Protein GI | 154253404 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0589522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGT TTTTGAGCCC CGCTCTCGTC TATGTTGCGG CTGCTGTCAT CTTGCCGTTC
ATTCCCCACG GCATCGGCCG GAAGCTGCTC CTGCTTGCGA CGCCGCTCGC CGGTGTGGCA
ATTTTCTGGG GCCTTCCCGA CGGCACCTAC AACACCCTCA ATCTCATGGG GATGCATGTC
GGCCTGATGC GTGTGGACAC GCTTTCGGTC GCGTTCGGGC TGGTCTTCTC GCTCGCCGCT
TTCCTCGCCG CGATCTATGC ATGGCACCTT CGCGATATGG TCCAGCAGGT TGCCGCCTTG
CTCTATGCGG GTTCCGCCAT CGGCGCGGTC TTCGCCGCCG ACTTCGTAAC CCTGTTTGTC
TTCTGGGAAG GCACAGCCAT CGCCTCGGTC TTCCTCGTCT GGGCCCGCCG CACCGAGGGC
GCCTATGCCG CGGGCATGCG CTACCTGACC GTTCAGATCA GCTCGGGTCT GCTGCTGCTC
GCCGGCGTAA TTCTCCTCTA CCTCGAAACC GGCTCAATAG GTTTCGGCTC CATGGAACTT
GGCAGCCTGG CCACATGGCT GGTCTTCTTG GCCTTCGGCA TCAAATGTGC GTTCCCTCTG
CTGCATAACT GGATGCACGA CGCCTATCCG GCTGCAACGG TGACCGGCAC AGTGCTTCTG
TCGGTCTTCA CGACCAAGCT CGCCGTCTAC GCGCTTGCGC GCGGTTTCCC CGGTACGGAA
CTGTTGATCT ATATCGGTGC GACGATGGCA CTCTTCCCCA TTTTCTTTGC ATTGATTGAA
AACGATCTGC GCCGCGTCTT GTCCTATTCG CTCAACAGTC AGCTCGGCAT CATGGTGGTT
GGCGTCGGCA TCGGCACCCC ACTGGCGCTG AACGGCACGG TCGCCCATGC CTTGAGCAGC
GTGTTCTATC AGGCCCTCTT GTTCATGAGC GTCGGCGCCG TTCTCTTCCG TACCGGTACA
TCCAAGGCTT CAGAGCTTGG CGGCCTCTAC AGGACCATGC CCTGGACGAT GCTCTTCTGC
CTCGTCGGCG GCGCATCCAT TGCGGCCTTC CCGCTCTTCT CGGGCTTTGT CTCCAAATCT
CTCATCCTCA GCGCCAGCGG CAAGGAAGGG TACTATTACG TATGGCTCGT CCTGCTCCTC
GCCTCCGCCG GTGCGTTCGT CCATTCCAGT TTGAAGGTTT CCTATTTTGC CTTTTTCGGT
ACCGACAGCG GCAAGCGCCC CTCGGAAGCG CCTCGCCACA TGCTTGTGGC AATGGGCGCT
ACGGCTCTGA TTTGTATCGG TATCGGTATT TATCCCGCAG TCTTGCGGCC TCTGCTTCCC
TATGACGTTA TCTACGAATC CTACACGACA GCGCACGTCA TAACCCAGTT GCAGCTTCTG
TTCTTCACCG CCCTCGCCTT TGCGGTCCTC TTGCGCTTCC GGCTCTTCCC CACCAGTGCG
GGATCGATCA ATCTGGATTC CGACTGGATC TACCGGCGTC TCCTGCCCGT GATTGCGGGC
GGGCTTACGC GTGCCGTGCA AGCCGCCTGG CGCTTCTCTG TCCGTGTCAC GGATGTCCGT
CTCGAGCGCC TGTTGAGCGG TGTCTACCGC GCGCACGGCC CGCAAGGCGC ATTGGCGCGC
ACATGGCCCA CAGGCTCCAT GGTATTGTGG ATCGCGGTTC TGCTCGGTGT CACACTGATG
CTGACCTATA TTTAA
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| Protein sequence | MPEFLSPALV YVAAAVILPF IPHGIGRKLL LLATPLAGVA IFWGLPDGTY NTLNLMGMHV
GLMRVDTLSV AFGLVFSLAA FLAAIYAWHL RDMVQQVAAL LYAGSAIGAV FAADFVTLFV
FWEGTAIASV FLVWARRTEG AYAAGMRYLT VQISSGLLLL AGVILLYLET GSIGFGSMEL
GSLATWLVFL AFGIKCAFPL LHNWMHDAYP AATVTGTVLL SVFTTKLAVY ALARGFPGTE
LLIYIGATMA LFPIFFALIE NDLRRVLSYS LNSQLGIMVV GVGIGTPLAL NGTVAHALSS
VFYQALLFMS VGAVLFRTGT SKASELGGLY RTMPWTMLFC LVGGASIAAF PLFSGFVSKS
LILSASGKEG YYYVWLVLLL ASAGAFVHSS LKVSYFAFFG TDSGKRPSEA PRHMLVAMGA
TALICIGIGI YPAVLRPLLP YDVIYESYTT AHVITQLQLL FFTALAFAVL LRFRLFPTSA
GSINLDSDWI YRRLLPVIAG GLTRAVQAAW RFSVRVTDVR LERLLSGVYR AHGPQGALAR
TWPTGSMVLW IAVLLGVTLM LTYI
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