Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2958 |
Symbol | |
ID | 5456068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3156180 |
End bp | 3157391 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878542 |
Product | VWA containing CoxE family protein |
Protein accession | YP_001414222 |
Protein GI | 154253398 |
COG category | [R] General function prediction only |
COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.958684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00204409 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGCTC GCCCTGCGGA GAATCATGGC CGCCTGGCGG AAAACATCGT CCATTTCGCC CGCGTGCTGC GCCGCGCCGG TCTCCGCGTC GGTCCGCGCC AGGTGCTCGA TGCTGTCGAA GCCGTCGAGG CGGCAGGCAT CGGCCCCCGC GCCGACTTCT ACTGGACCCT CCATGCGACA CTCGTGAAGC GCCACGAGGA ACGCGAGATT TTCGATCAGG CGTTTCACGT CTTCTGGCGC GACCCGAAGC TCCTCGACAA GATGATGTCG CTGATGCTTC CCGAGATCGA AACGCCGCCA GGTGCAACGG ACGAAGAAAA AAGCCGCCGC CTCGCCGAGG CCCTGTTCGG CGAAACCCGT CCGCAGGCGC CGGAAGAGCC GGATATCGAA ATCGACCGCA GTGAAACCTT CTCGGCCGAG GAGTTGCTCC GGACAAAGGA TTTCGAGCAG ATGTCCGCCG CGGAACTGGC GGAAGCCAAA GCCGCGATCT CCCGTCTCCA CCTCTCGCAT GACGATATCC GCACCCGCCG CACGCGCCCC TCCTCGCGCG GCCAGATGAT CGACATGCGA GCGACCTTGC GTGCGACGCT CCGCTCTGGC GGCGTCATTC CTCTGAAACG CCGTACCTTT CGCCGCCGCC GCCCGCCGCT CGTCATCCTC TGCGACATCT CCGGCTCCAT GTCGGTCTAC GCGCGCGTCT TCCTCCACTT CCTGCATGTG CTGGCGAACG GCCGCGACCG GGTCCACATC TTCCTCTTCG GCACCCGCCT CACCCATGTC ACCCGGGAGC TGAAACACCG CGACATAGAC GAGGCGCTGG CCCGCGTCGC CGCCCGTGTC GAGGATTGGG ATGGCGGCAC ACGCATAGGC GAGACGCTCC ACCGCTTCAA TGTCGATTGG GCCCGCCGTG TTCTCGGTCA GGGCGCCACG GTCCTCCTCG TGACTGACGG TCTGGATCGG GATGCCGGCG AAGGCGTCGG CCCGGAAATC GCCCGCCTCC ACCGCCAGGC CCGCCGCCTC ATCTGGCTGA ACCCGCTTCT GCGCTATGAG CGTTTCGAGC CGAAATCCCT CGGCATCCGC GCGCTCCTCC CCCATGTGGA CGAGTTCCGC CCGGTCCATA ATCTCGCCTC GCTTGCCTCT CTGGTCGAAG CCCTCTCCGA TGCCCATATC GGCAGGAAGC CGGAAAGGCC GGGAAGGAAG GAAGCCGCAT GA
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Protein sequence | MPARPAENHG RLAENIVHFA RVLRRAGLRV GPRQVLDAVE AVEAAGIGPR ADFYWTLHAT LVKRHEEREI FDQAFHVFWR DPKLLDKMMS LMLPEIETPP GATDEEKSRR LAEALFGETR PQAPEEPDIE IDRSETFSAE ELLRTKDFEQ MSAAELAEAK AAISRLHLSH DDIRTRRTRP SSRGQMIDMR ATLRATLRSG GVIPLKRRTF RRRRPPLVIL CDISGSMSVY ARVFLHFLHV LANGRDRVHI FLFGTRLTHV TRELKHRDID EALARVAARV EDWDGGTRIG ETLHRFNVDW ARRVLGQGAT VLLVTDGLDR DAGEGVGPEI ARLHRQARRL IWLNPLLRYE RFEPKSLGIR ALLPHVDEFR PVHNLASLAS LVEALSDAHI GRKPERPGRK EAA
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