Gene Plav_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2958 
Symbol 
ID5456068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3156180 
End bp3157391 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content66% 
IMG OID640878542 
ProductVWA containing CoxE family protein 
Protein accessionYP_001414222 
Protein GI154253398 
COG category[R] General function prediction only 
COG ID[COG3552] Protein containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.958684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00204409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGCTC GCCCTGCGGA GAATCATGGC CGCCTGGCGG AAAACATCGT CCATTTCGCC 
CGCGTGCTGC GCCGCGCCGG TCTCCGCGTC GGTCCGCGCC AGGTGCTCGA TGCTGTCGAA
GCCGTCGAGG CGGCAGGCAT CGGCCCCCGC GCCGACTTCT ACTGGACCCT CCATGCGACA
CTCGTGAAGC GCCACGAGGA ACGCGAGATT TTCGATCAGG CGTTTCACGT CTTCTGGCGC
GACCCGAAGC TCCTCGACAA GATGATGTCG CTGATGCTTC CCGAGATCGA AACGCCGCCA
GGTGCAACGG ACGAAGAAAA AAGCCGCCGC CTCGCCGAGG CCCTGTTCGG CGAAACCCGT
CCGCAGGCGC CGGAAGAGCC GGATATCGAA ATCGACCGCA GTGAAACCTT CTCGGCCGAG
GAGTTGCTCC GGACAAAGGA TTTCGAGCAG ATGTCCGCCG CGGAACTGGC GGAAGCCAAA
GCCGCGATCT CCCGTCTCCA CCTCTCGCAT GACGATATCC GCACCCGCCG CACGCGCCCC
TCCTCGCGCG GCCAGATGAT CGACATGCGA GCGACCTTGC GTGCGACGCT CCGCTCTGGC
GGCGTCATTC CTCTGAAACG CCGTACCTTT CGCCGCCGCC GCCCGCCGCT CGTCATCCTC
TGCGACATCT CCGGCTCCAT GTCGGTCTAC GCGCGCGTCT TCCTCCACTT CCTGCATGTG
CTGGCGAACG GCCGCGACCG GGTCCACATC TTCCTCTTCG GCACCCGCCT CACCCATGTC
ACCCGGGAGC TGAAACACCG CGACATAGAC GAGGCGCTGG CCCGCGTCGC CGCCCGTGTC
GAGGATTGGG ATGGCGGCAC ACGCATAGGC GAGACGCTCC ACCGCTTCAA TGTCGATTGG
GCCCGCCGTG TTCTCGGTCA GGGCGCCACG GTCCTCCTCG TGACTGACGG TCTGGATCGG
GATGCCGGCG AAGGCGTCGG CCCGGAAATC GCCCGCCTCC ACCGCCAGGC CCGCCGCCTC
ATCTGGCTGA ACCCGCTTCT GCGCTATGAG CGTTTCGAGC CGAAATCCCT CGGCATCCGC
GCGCTCCTCC CCCATGTGGA CGAGTTCCGC CCGGTCCATA ATCTCGCCTC GCTTGCCTCT
CTGGTCGAAG CCCTCTCCGA TGCCCATATC GGCAGGAAGC CGGAAAGGCC GGGAAGGAAG
GAAGCCGCAT GA
 
Protein sequence
MPARPAENHG RLAENIVHFA RVLRRAGLRV GPRQVLDAVE AVEAAGIGPR ADFYWTLHAT 
LVKRHEEREI FDQAFHVFWR DPKLLDKMMS LMLPEIETPP GATDEEKSRR LAEALFGETR
PQAPEEPDIE IDRSETFSAE ELLRTKDFEQ MSAAELAEAK AAISRLHLSH DDIRTRRTRP
SSRGQMIDMR ATLRATLRSG GVIPLKRRTF RRRRPPLVIL CDISGSMSVY ARVFLHFLHV
LANGRDRVHI FLFGTRLTHV TRELKHRDID EALARVAARV EDWDGGTRIG ETLHRFNVDW
ARRVLGQGAT VLLVTDGLDR DAGEGVGPEI ARLHRQARRL IWLNPLLRYE RFEPKSLGIR
ALLPHVDEFR PVHNLASLAS LVEALSDAHI GRKPERPGRK EAA