| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2955 |
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| Symbol | |
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| ID | 5456742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3153553 |
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| End bp | 3155172 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640878539 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001414219 |
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| Protein GI | 154253395 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2068] Uncharacterized MobA-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0101502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCG GCCACATGCC GCCCGACGAT GCCGAGGGCG CGATCCTCGC CCATTCGCAA
AAAGCCGGAA CCGGAACCTT CAAGAAAGGC CGCATCCTCA GCCGCGCGGA CATTGCCGCC
CTGAAGGAGG CTGGCGTCAC GAGCGTCGTC GCCGCCCGCC TCGAAGTCAC GGACGTCCCC
GAGGACGAAG CCGCCGCCGC GCTGGCGGAT GCGCTCGCCG GCAAGTCCAT CCGCGTCGCC
GCGCCCTTCA CCGGCCGCGC CAATCTCTAC GCCACGGGAA ACGGCGTCCT CGAAATCGAC
GCCGCCCGCA TCCACGCCAT CAACGCCATC GGCGAGGCGC TCACCGTCGC CACCCTCGCC
CCCTTCGAGA CCGTGGCGGA CCGGCAGATG CTCGCCACCG TGAAGGTGAT CCCCTTCGCC
GTTCCCCGCG CCGAACTCGA CAAGGCGCTC GATATCGCCC GCTCCGGCCC CGCTCCCATT
GCGCTCAGCC GCTTCGAGCC GCACCGCATC GGCCTCGTCG CCACCCAACT CCCCGGAACG
AAGGAAAGCG TTCTCACGAA AAGCCGCGCC GTCCTCGACG CCCGCCTCGC CACCATGGGA
AGCACAATCG CCCGCGAAAT CCGCGCGCCC CACGACACCG GCGCCATTGC GGATGCCGTG
CGCGCGCTTG CGGCGGACGG CCTCTCCCCC ATCCTCGTCT TCGGCGCCTC CGCCACGGTC
GACCGGCGCG ATGTCGTACC CGCGGGCATC GTCATGGCAG GCGGCGACAT CCTCCATTTC
GGCATGCCGG TCGACCCCGG CAATCTCATG CTCCTCGCCC GCCTCGGCGA GACGCCCGTC
ATCGGCCTCC CCGGCTGCGC CCGCTCGCCA AAGCTCAACG GCTGCGACTG GGTGCTTGCC
CGCCTCATCG CGGGACTGGA AGTCACGCCG AAAGACATCA TGGGAATGGG CCTGGGCGGC
CTCCTGAAGG AAATCCCCTC GCGGCCCCAG CCCCGCGAGG GCCGCGCCCC CGCCGCCGGG
TCGCAGCCCC GTATCGCCGC CATCATCCTC GCGGCCGGTC GCTCGACGCG CATGGCCGGA
CCGCAGAACA AGCTGCTGAT GCCGCTCGGC GGCAGGCCCA TGATCGCCCA TATCGTGGAA
GCCGCCCTTG CCAGTGCCGC CCGCCCGGTC ATCGTCGTCA CCGGCAATGC AGACAATGAA
GTCCGCGCCG CCCTCGCCGG CCAGGACGTC ACCTTCGTTC ACAACCCGGA CTATGCGGAC
GGCCTCTCGA CCTCGCTCCG CACCGGCCTC GCCGCACTGC CCGACGACGC GGATGGCGCC
CTCGTCTGCC TCGGCGACAT GCCGGACATC AAGGCGTCCC ACCTCGACCG CCTCATCGCC
GCCTTCGACC CGGAAGAAAA CCGCACCATC TGCGTGCCCA CCGTCGCCAG CAAACGCGGC
AACCCCGTCC TCTGGGGCCG CGAATGGTTC GAGGCCATGA TGGAAACCAA GGGCGACACC
GGCGCCAAAC ACCTCATCGG CGAAAACCCC GACGCCCTCT GCGAAGTCCC CATGCCGGAT
GACGCGCCGC TTACCGACAT CGACACGCAA GCCGAGATGG AATCCCGGCG CAGCGATTAG
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| Protein sequence | MIFGHMPPDD AEGAILAHSQ KAGTGTFKKG RILSRADIAA LKEAGVTSVV AARLEVTDVP
EDEAAAALAD ALAGKSIRVA APFTGRANLY ATGNGVLEID AARIHAINAI GEALTVATLA
PFETVADRQM LATVKVIPFA VPRAELDKAL DIARSGPAPI ALSRFEPHRI GLVATQLPGT
KESVLTKSRA VLDARLATMG STIAREIRAP HDTGAIADAV RALAADGLSP ILVFGASATV
DRRDVVPAGI VMAGGDILHF GMPVDPGNLM LLARLGETPV IGLPGCARSP KLNGCDWVLA
RLIAGLEVTP KDIMGMGLGG LLKEIPSRPQ PREGRAPAAG SQPRIAAIIL AAGRSTRMAG
PQNKLLMPLG GRPMIAHIVE AALASAARPV IVVTGNADNE VRAALAGQDV TFVHNPDYAD
GLSTSLRTGL AALPDDADGA LVCLGDMPDI KASHLDRLIA AFDPEENRTI CVPTVASKRG
NPVLWGREWF EAMMETKGDT GAKHLIGENP DALCEVPMPD DAPLTDIDTQ AEMESRRSD
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