| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2946 |
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| Symbol | |
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| ID | 5456745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3143739 |
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| End bp | 3145055 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878529 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_001414210 |
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| Protein GI | 154253386 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.470523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00956277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCAAGG CTCTCAGGAT AGGCATTGCC GGCCTCGGCA CTGTCGGGGC GGGCGTCGTC
AAGATATTGG CCGCGCGCGG CGACTATCTC GCGGCGGCGT GCGGGCGGCC GATCGAGCTT
GTCGCGGTGT CGGCGCGCAA CTCCAACAAG GATCGCGGCA TCGACCTTTC CGGCGTGCGC
TGGGAGAGCG ATCCGATGGC GCTCGCGCGG GCGGACGATA TCGACCTCGT GGCGGAACTG
ATCGGCGGCT CGGAAGGCGT TGCGCGCGAA CTCGTGGAAG CGGCGCTCAA GGCTGGCAAG
CATGTCGTCA CCGCGAACAA GGCGCTGATC GCGCATCACG GCACGGCGCT GGCGCGGCTC
GCGGAAGAGA AGGGCGTTGC GCTCAATTAT GAAGCGGCGG TGGCCGGCGG CATACCGATC
GTCAAGACGA TGCGCGAGAG CCTGGCGGGC AACGAGATCC GCAGCATTCA CGGCATTCTG
AACGGCACCT GCAACTACAT CCTGACCGAG ATGGAGACGA CGGGGCGCGA CTTCGCGGAT
GTGCTGAAGG ATGCGCAGGA TCTCGGCTAT GCGGAGGCCG ACCCGACATT CGACGTGGGC
GGGATCGACG CGGCGCACAA GCTGGCGATC CTGGCGAGCC TTGCCTTCGG CACGGAAGTC
GACTTCGCCA ATGTGCATAT CGAGGGCATC GAGAAGATCA GCGCGACCGA CATCGCCTTT
GCGCGCGAGT TCGGCTTCAA GGTGAAGCTG CTGGCGATTG CCGAGAAGGT GGATGGCGGC
GTCGTGCAGC GCGTGCATCC GGCGCTGGTG CCCGAGGGAA CGCCGCTGGC GGCGGTGTCC
GGCGTTTACA ACGCGGTAGC GGTCGATGGC GACAGGGTGG GGCATCTCGT GCTTGAAGGG
CGCGGCGCCG GCGAGGGGCC GACGGCTTCG GCCGTGCTGT CCGATCTCGC GGATATTGCG
CGCGGGCTCA TCCTGCCGCC GTTCATTCTG CCGGCAAAGA AGCTGAAGGC GCCGGCGAAG
CCCGCGATGG ATACGCATAA AAGTTCGTTC TATCTGCGGT TTCTTGCCGT GGACCGCGCG
GGCAGCATGG CCGCGATCAC GCAGGCGCTG GCGCAGGCCT CCGTCTCGAT CGAGCGGATC
GTGCAGCGCG GCGAGGCGGG GAAGAAGGCA AGCGGCGACG GCAGGCTGCC GGTGGTTTTC
ATCACGCATG AGACGGATGA AGGCACGATG GCCCGCGTGC GGGCATTACT AGCGGAACAT
GAAGACGTGG CGGGCACGCC GCAGGTCGTG AGGATCGAGG ACGGCGAGCT TCGCTGA
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| Protein sequence | MTKALRIGIA GLGTVGAGVV KILAARGDYL AAACGRPIEL VAVSARNSNK DRGIDLSGVR
WESDPMALAR ADDIDLVAEL IGGSEGVARE LVEAALKAGK HVVTANKALI AHHGTALARL
AEEKGVALNY EAAVAGGIPI VKTMRESLAG NEIRSIHGIL NGTCNYILTE METTGRDFAD
VLKDAQDLGY AEADPTFDVG GIDAAHKLAI LASLAFGTEV DFANVHIEGI EKISATDIAF
AREFGFKVKL LAIAEKVDGG VVQRVHPALV PEGTPLAAVS GVYNAVAVDG DRVGHLVLEG
RGAGEGPTAS AVLSDLADIA RGLILPPFIL PAKKLKAPAK PAMDTHKSSF YLRFLAVDRA
GSMAAITQAL AQASVSIERI VQRGEAGKKA SGDGRLPVVF ITHETDEGTM ARVRALLAEH
EDVAGTPQVV RIEDGELR
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