Gene Plav_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2940 
Symbol 
ID5456768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3137847 
End bp3138689 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID640878523 
Producthypothetical protein 
Protein accessionYP_001414204 
Protein GI154253380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0704111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00163659 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCCTCA CCGTCACTCT CGCCGTCCTC GCCTCCGCCC TGCTGCATGC AAGCTGGAAC 
GCGCTCGTCA AAACCGGCGC CGACCGTCTC ATGATGATGG GCTGGATCGC GGCGGCAACG
GGCCTCGTCG CGCTGCCCTT CCTGCCCTTC ATTCCGCTCC CCGGCTGGGA CGTCGCGAAG
ATCCTCGCCC TCTCCTTCGT GCTTCACGTC GGCTACAAGC TCTTCCTCGT GAAGGGCTAC
GAGCACGGCG ATTTCGGTCA GGTCTACCCG CTGTCGCGCG GGCTCGCCCC CGCCATCGTT
ACGGTGGTCG GCGCCGTCTG GCTCGGCGAA ATCCTCCCCA CCGCCGCCTT TGTCGGCGTC
GCCCTGATCG CGCTCGGCAT CGTCAGCCTC GCCTTCCGCC GCACCAATGG CGCCGGCCTC
CCCAACGATC CGCGCGCGCT TGGCTACGCC TTCGGCACCT CGCTCTTCAT CGCCGCCTAT
ACGCTGAATG ACGGCCTCGG CGGCCGCATC GCCGAAAGCC CGCACATCTA CGTCATCTGG
CTCTTCGCCG GCGACGGGCT GATCTTCTTC CTGTTCGTGC TCTGGCGGCG CGGCCGCGCC
TTCCTCAGGC CCCAGCGCGC CATGGCCTAT GGCTTCGCGG GCGGCGTCAT GTCCGTCATC
GCCTATTGGC TTGTTATCTG GGCCATGACG CTCGCACCCC TCGGCCCCGT CGCGGCCTTG
CGCGAAACCA GCGTCGTCTT CGCCGCCCTC ATTTCCGGCC TCCTCCTGAA AGAAGGCCTC
GGCTGGCGCG CCGTCGCCGC CGCCTGCGTC GTCGCAGCGG GCGTCATATT GCTGAAGGTC
TAG
 
Protein sequence
MTLTVTLAVL ASALLHASWN ALVKTGADRL MMMGWIAAAT GLVALPFLPF IPLPGWDVAK 
ILALSFVLHV GYKLFLVKGY EHGDFGQVYP LSRGLAPAIV TVVGAVWLGE ILPTAAFVGV
ALIALGIVSL AFRRTNGAGL PNDPRALGYA FGTSLFIAAY TLNDGLGGRI AESPHIYVIW
LFAGDGLIFF LFVLWRRGRA FLRPQRAMAY GFAGGVMSVI AYWLVIWAMT LAPLGPVAAL
RETSVVFAAL ISGLLLKEGL GWRAVAAACV VAAGVILLKV