Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2940 |
Symbol | |
ID | 5456768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3137847 |
End bp | 3138689 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640878523 |
Product | hypothetical protein |
Protein accession | YP_001414204 |
Protein GI | 154253380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0704111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00163659 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGACCCTCA CCGTCACTCT CGCCGTCCTC GCCTCCGCCC TGCTGCATGC AAGCTGGAAC GCGCTCGTCA AAACCGGCGC CGACCGTCTC ATGATGATGG GCTGGATCGC GGCGGCAACG GGCCTCGTCG CGCTGCCCTT CCTGCCCTTC ATTCCGCTCC CCGGCTGGGA CGTCGCGAAG ATCCTCGCCC TCTCCTTCGT GCTTCACGTC GGCTACAAGC TCTTCCTCGT GAAGGGCTAC GAGCACGGCG ATTTCGGTCA GGTCTACCCG CTGTCGCGCG GGCTCGCCCC CGCCATCGTT ACGGTGGTCG GCGCCGTCTG GCTCGGCGAA ATCCTCCCCA CCGCCGCCTT TGTCGGCGTC GCCCTGATCG CGCTCGGCAT CGTCAGCCTC GCCTTCCGCC GCACCAATGG CGCCGGCCTC CCCAACGATC CGCGCGCGCT TGGCTACGCC TTCGGCACCT CGCTCTTCAT CGCCGCCTAT ACGCTGAATG ACGGCCTCGG CGGCCGCATC GCCGAAAGCC CGCACATCTA CGTCATCTGG CTCTTCGCCG GCGACGGGCT GATCTTCTTC CTGTTCGTGC TCTGGCGGCG CGGCCGCGCC TTCCTCAGGC CCCAGCGCGC CATGGCCTAT GGCTTCGCGG GCGGCGTCAT GTCCGTCATC GCCTATTGGC TTGTTATCTG GGCCATGACG CTCGCACCCC TCGGCCCCGT CGCGGCCTTG CGCGAAACCA GCGTCGTCTT CGCCGCCCTC ATTTCCGGCC TCCTCCTGAA AGAAGGCCTC GGCTGGCGCG CCGTCGCCGC CGCCTGCGTC GTCGCAGCGG GCGTCATATT GCTGAAGGTC TAG
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Protein sequence | MTLTVTLAVL ASALLHASWN ALVKTGADRL MMMGWIAAAT GLVALPFLPF IPLPGWDVAK ILALSFVLHV GYKLFLVKGY EHGDFGQVYP LSRGLAPAIV TVVGAVWLGE ILPTAAFVGV ALIALGIVSL AFRRTNGAGL PNDPRALGYA FGTSLFIAAY TLNDGLGGRI AESPHIYVIW LFAGDGLIFF LFVLWRRGRA FLRPQRAMAY GFAGGVMSVI AYWLVIWAMT LAPLGPVAAL RETSVVFAAL ISGLLLKEGL GWRAVAAACV VAAGVILLKV
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