Gene Plav_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2938 
Symbol 
ID5456028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3136096 
End bp3136584 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID640878521 
Productribosomal protein S9 
Protein accessionYP_001414202 
Protein GI154253378 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.000844995 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGAAA CAACCTCACT CGAAGACCTG AAGGGTGCGA TGGAAGGCAC GAGCGCGTCG 
GCCGACGCGA ACGCCGTGCC GGCTGTGCAG AAGCTCGACA AGTTCGGCCG CGCCTATGCG
ACCGGCAAGC GCAAGAATGC GGTCGCCCGC GTCTGGATCA AGCCGGGCTC CGGCCGCGTC
AAGATCAACG GCCGCGACCT CGAAGTCTAT TTCGCGCGTC CCGTTCTGCG CATGATCCTC
AACCAGCCGC TCGTCGTTGC GGCCCGCGAG AAGCAGTACG ACATCACCGC GACGGTGGTG
GGCGGCGGTC TCTCCGGCCA GGCGGGTGCC ATCCGCCATG GCATTTCGCG CGCGCTGACC
TATTTCGAGC CGTCGCTGCG CGGCGTGCTC AAGAAGGAAG GCTTCCTCAC GCGCGACAGC
CGTGTGGTCG AACGCAAGAA GTACGGCAAG GCGAAGGCCC GCCGCAGCTT CCAGTTCTCG
AAGCGCTGA
 
Protein sequence
MSETTSLEDL KGAMEGTSAS ADANAVPAVQ KLDKFGRAYA TGKRKNAVAR VWIKPGSGRV 
KINGRDLEVY FARPVLRMIL NQPLVVAARE KQYDITATVV GGGLSGQAGA IRHGISRALT
YFEPSLRGVL KKEGFLTRDS RVVERKKYGK AKARRSFQFS KR