Gene Plav_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2935 
Symbol 
ID5456175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3133948 
End bp3134769 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content67% 
IMG OID640878518 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001414199 
Protein GI154253375 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0017048 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGC CCGCCGAAAG CCCCGCCGCC GCCGATCCGC TGCTCATCCG CGAGGATGCG 
AACGGCGTCG CCCGTCTCAC GATGAACCGC CCGGCGCAGC GCAACGCGCT TTCCATCGGC
CTCATGACCG CCCTGCAGCA GGAGCTGGCG CGCCTCGCCG CCGATCCGAA TATCCGCGCC
ATCGTGCTCG CGGGCGCCGG TCCCGCCTTC TGCGCCGGCC ACGACCTGAA GGAACTCACC
CTCGCCCGCA ACCAGTCGGA TCGCGGCCGC GATTTCTTCG CCCGCACCAT GAAGCAATGC
AGCGCGCTGA TGCAGGCGAT CGTCGCCTGC CCGAAACCCG TCATCGCCCG CGTCCATGGC
ATCGCGACGG CGGCCGGCTG CCAGCTCGTC GCCAGCTGCG ATCTCGCCGT CGCCGCCAAC
ACCGCGAAAT TCGCGACGCC CGGCGTCAAT ATCGGCCTCT TCTGCTCGAC GCCCATGGTC
GCCCTCTCGC GCAATGTCGC GCGCAAGCAC GCCATGGAAA TGCTGCTCAC CGGCGAAATG
ATCTCCGCCG ATCGCGCCTG CGAGATGGGC CTCGTCAATC GCGCCGTCAC CCCGTCGGAA
CTCGATGCCG CCGTCGCGCA TTTTGCCGAT ACCATCGCGG CGAAATCCGC CCTCACCGTC
TCCATTGGCA AGAAGGCCTT CTACGACCAG CTCGAAAAGC CGCTCGCCGA AGCCTATGAC
TATGCCAGCG AAGTGATGGT GACCAACATG CTCGCCCGCG ACGCCGAGGA AGGCATCGGC
GCCTTCATCG AGAAACGCGA TCCGAAATGG GAGGACAGAT GA
 
Protein sequence
MSQPAESPAA ADPLLIREDA NGVARLTMNR PAQRNALSIG LMTALQQELA RLAADPNIRA 
IVLAGAGPAF CAGHDLKELT LARNQSDRGR DFFARTMKQC SALMQAIVAC PKPVIARVHG
IATAAGCQLV ASCDLAVAAN TAKFATPGVN IGLFCSTPMV ALSRNVARKH AMEMLLTGEM
ISADRACEMG LVNRAVTPSE LDAAVAHFAD TIAAKSALTV SIGKKAFYDQ LEKPLAEAYD
YASEVMVTNM LARDAEEGIG AFIEKRDPKW EDR