| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2929 |
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| Symbol | |
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| ID | 5455629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3128796 |
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| End bp | 3129833 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640878512 |
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| Product | appr-1-p processing domain-containing protein |
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| Protein accession | YP_001414193 |
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| Protein GI | 154253369 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000529825 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000428474 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGGCATG CCGTGATCGA GTTTAGAACT GGCGACATTC TGGACGCGGA TGTGGAAGCG
CTCGTGAATA CAGTTAACTG TGTGGGTATC ATGGGGCGCG GTATTGCGCT TCAGTTCAAG
AATGCTTTTC CCGAAAATTT CAAAGCTTAT AAGGCTGCAT GTGATTGTCA GGAAGTGCAG
CCCGGCAAAA TGTTTGTATT TGAAACTCAC AAGTTTACTG GCCCTAGGTT TGTCATCAAT
TTTCCGACCA AGCGTCATTG GCGTGGCAAA AGCCGTATGG AAGACATTGA CTCCGGGCTC
AAGGCACTCG TAGGAGAAAT CCGCCAACGT GGCATTCGAT CAATTGCTGT TCCGCCGTTG
GGGAGTGGGC TCGGTGGTTT GGTTTGGGCT GACGTGCGTC CACGAATTAA GGCAGCTTTA
CAAGATATTG AAGGGCTCAA AGTGATTGTT TTTGAGCCTA GTGCTGCAGT TGTTACGACG
AAGTCCCGGG AAATACCAAA AATGACAGCA GGGCGTGCTG CTCTTGTTGT GTTGATGTAT
CGGTATCTGG GAGGGCTGAT GGACCCTTTC GTAACGCTGC TTGAAATCCA CAAGCTTCTG
TATTTTATGC AAGAAGCCGG TGAATCTTTG CGTTTGAAGT ATGCGAAAGC ACCATATGGT
CCTTACGCAG AAAATTTACG ACATGTGCTC AGTGCAGTGG AGGGGCATCT GGTGTCCGGC
TATGCAGATG GCGGTGACAC GCCAGATAAA CAAATCGAAT TAGTGCCCGG TGCGGTCCAA
GATGCCGAGG CTTATCTTGA TCACAACACG GATACTATTA GTCGTTTTGA TCGTGTTGGG
AAACTTGTTG AGGGATTTGA AACACCGTTC GGACTCGAAC TTCTGGCGAC TGTTCATTGG
GTTGTTACGC GCGAAAATGC TTCCTCTGCT GAAGAAGCCG CTGAAAAAGT ATACGCATGG
AGTGATCGTA AGAAACGCTT CACGCCTCGT CAGATAGCTA TCGCTTTTGA TACGCTACGC
TCGAAGGGCT GGGCTTGA
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| Protein sequence | MGHAVIEFRT GDILDADVEA LVNTVNCVGI MGRGIALQFK NAFPENFKAY KAACDCQEVQ
PGKMFVFETH KFTGPRFVIN FPTKRHWRGK SRMEDIDSGL KALVGEIRQR GIRSIAVPPL
GSGLGGLVWA DVRPRIKAAL QDIEGLKVIV FEPSAAVVTT KSREIPKMTA GRAALVVLMY
RYLGGLMDPF VTLLEIHKLL YFMQEAGESL RLKYAKAPYG PYAENLRHVL SAVEGHLVSG
YADGGDTPDK QIELVPGAVQ DAEAYLDHNT DTISRFDRVG KLVEGFETPF GLELLATVHW
VVTRENASSA EEAAEKVYAW SDRKKRFTPR QIAIAFDTLR SKGWA
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