Gene Plav_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2925 
Symbol 
ID5455949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3125507 
End bp3125974 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID640878507 
ProductMerR family transcriptional regulator 
Protein accessionYP_001414189 
Protein GI154253365 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00455933 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.00151967 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTCTACAC AAAAGTCACC GGATGCGTTT CGGACCATCA GCGAGGTTGC GACCGAGCTG 
GATGTGCCGC AGCACGTGCT GCGCTTCTGG GAGAGCAAGT TCAACCAGAT CAGGCCGCTG
AAGCGCGGTG GCGGGCGGCG CTATTACCGG CCCGAGGATG TGGACCTGCT GAGGGGCGTC
CGGACGCTGC TCTACAATGA CGGCTACACG ATCAAGGGCG TCCAGAAAGT CTTTCGGGAA
CAAGGCGTTA AGTTCGTCGC GGAGACCGGC AGGGGCACTG TCGACACGTC GCTCGCGGAG
CTGGCGCGCG AGGCCGTGCA GCGCGGCGAG CAGGAAGAAC GGGAAGAGCC CGGAAAACCT
ATCGGAATGA GCGGCCGCAA GCGGCTGGAA GAGCTGCTGG AAGACCTGGT GTCGCTGAAG
GACGAGATCG ACGAGACGCT CTGGGAGAGC GAAGAGGAGG AAGGCTGA
 
Protein sequence
MSTQKSPDAF RTISEVATEL DVPQHVLRFW ESKFNQIRPL KRGGGRRYYR PEDVDLLRGV 
RTLLYNDGYT IKGVQKVFRE QGVKFVAETG RGTVDTSLAE LAREAVQRGE QEEREEPGKP
IGMSGRKRLE ELLEDLVSLK DEIDETLWES EEEEG