| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2923 |
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| Symbol | |
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| ID | 5456994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3124001 |
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| End bp | 3124978 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878505 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase III |
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| Protein accession | YP_001414187 |
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| Protein GI | 154253363 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.437795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000795877 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAGTGTTA CCAGAACCGT AGTCGTCGGC GTGGGCAGCT ATTTGCCGGC GCGGATCATG
ACGAACGAGG ACATTTCCAA GGTCGTCGAT ACGACGGATG AGTGGATTGT CGAGAGAACG
GGCATTCACC AGCGGCATAT CGCGGCCGAT GACGAAATGA CGTCCCATCT GGCAATTGCC
GCGGCCCGCA AGGCTATCGA ACACGCGGGA ATCGACACCC AGGAGATCGA TACGATCATT
CTGGCGACGA CGACGCCCGA CCAGACATTT CCGGCAACCG CGGCCACGGT GCAAGCGGAG
CTGGGGCTCC ATCATGGGGC GGCATTCGAT ATCCAGGCGG TGTGTTCGGG CTTCGTCTAT
GCGCTGACAA TCGCGGATAC ATTCATAAAA ACAGGCCAGT CGAAGACGGC GCTGGTTATC
GGCGCGGAGA CCTTTTCCCG GCTGCTCGAC TGGACCGACC GGACGACATG CGTGCTTTTC
GGCGATGGCG CCGGCGCCGT GGTGGTGAAG GGCATGGAGG GCGAGGGAAA CAACTCGGAT
CAGGGTATCC TGACCGCGCA TCTCCATTCG GACGGTCGCT ACCGGGACAA GCTCTATGTG
GATGGCGGAC CATCATCGAC GCAGTCCACG GGGCATGTGC GGATGGAAGG GCGCGAAGTT
TTCCGCCATG CGGTGGTCAA TATCGCCGAG GCGATCAATG AATCGCTTGA GGCGACGGGG
CTGTCGGCGG ACGATATAGA CTGGTTCGTC CCTCACCAGG CGAACAAGCG CATTCTCGAT
GGCACGGCAA AAAGGATAGG TTTGCCGCCG GAAAAGGTGG TGCTGACGGT GGCCGACCAG
GGCAATACGT CGGCGGCATC CGTTCCGCTG GCGCTGGATG CGGCGGTGAA GGATGGACGA
ATCAAGCGGG GCCAGCTTGT CTTGCTTGAG GCGATGGGCG GCGGTTTCAC CTGGGGTTCG
CTGCTCTTCC GATTCTAG
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| Protein sequence | MSVTRTVVVG VGSYLPARIM TNEDISKVVD TTDEWIVERT GIHQRHIAAD DEMTSHLAIA
AARKAIEHAG IDTQEIDTII LATTTPDQTF PATAATVQAE LGLHHGAAFD IQAVCSGFVY
ALTIADTFIK TGQSKTALVI GAETFSRLLD WTDRTTCVLF GDGAGAVVVK GMEGEGNNSD
QGILTAHLHS DGRYRDKLYV DGGPSSTQST GHVRMEGREV FRHAVVNIAE AINESLEATG
LSADDIDWFV PHQANKRILD GTAKRIGLPP EKVVLTVADQ GNTSAASVPL ALDAAVKDGR
IKRGQLVLLE AMGGGFTWGS LLFRF
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