| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2915 |
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| Symbol | |
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| ID | 5456797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3114952 |
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| End bp | 3115968 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878497 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_001414179 |
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| Protein GI | 154253355 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0468053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00439314 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGCTC GGAGCAAGCC TGAAGGCGGC AATGGCGGCC GGCCGAGCGA ATTCGCGTTG
ATTGAAGATC TGTTCGCGCC ACTGGCGGCA GGGGCACCGG GCGCTTACGG TCTTAAAGAC
GACGCCGCAC TTTTTTCTCC CTCACCAGAC CATGAAACCG TGCTCACCGT CGACGCGATG
GTGGCCGGTG TCCATTTCCT GCCCGACGAT CCGCCTGAAA CGGTTGCCCG AAAGCTTCTA
CGTGTGAACC TGTCCGACCT TGCAGCGAAA GGGGCGACAC CACGAGGGTA CCTTCTCGTG
ACCGCATGGC GGGCAGAGAC ATCCGTCGAC TGGATGCGGG GCTTTGCTGC CGGGCTTATG
GAGGACCAAA ACCTCTTCGG CATATCGCTA TGGGGTGGCG ATACCGTGAC CACGACAGGT
CCGATGACGC TCTCTCTTAC GGCGATTGGC GAGGTCGCCG CCGGACAGAT GATCCGCAGA
GGCGGTGCCC GGCCGGGCGA CGACATCTAT GTCACCGGCA CCGTTGGCGA TGCGGCGCTC
GGCCTCTCGG TGTTGCGTGG GGCGTTGGAC ATGCCTGATA CAGCGGATGC CGCACATCTG
GTGAGGCGGT ACAGGGAGCC GGAACCACGG ACAGCTTTTG GACCGAAGCT TTGTGGCGTG
GCCCATGCCG CACTCGATGT TTCGGACGGG CTGATGGCGG ATCTTGGCCA TATTTGTGAG
GTTTCCGGAA CAGGAGCACG AATCAACATG GAGTCCGTGC CGTTGTCCCG TGCGGCAAGG
GCCGCGCTCG CACGCGACCC CCGCCTTGTC GAGGCGGTGG CGGGGGGAGG AGATGACTAC
GAGATTCTCT TCGCCGCACC GCCTGACCGA GCATCGAAGA TTGGGGCTAT CGCTGCGGAA
AGCGGCATTT CGGCGACCAG AATTGGGACG ATGACGGAAC AAAGTGACGG CGTGAGTGCC
ATCGACGGGG CAGGGAATAA GATCGCGCTC AAGCAATTGG GATATCGCCA CTTTTAG
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| Protein sequence | MAARSKPEGG NGGRPSEFAL IEDLFAPLAA GAPGAYGLKD DAALFSPSPD HETVLTVDAM
VAGVHFLPDD PPETVARKLL RVNLSDLAAK GATPRGYLLV TAWRAETSVD WMRGFAAGLM
EDQNLFGISL WGGDTVTTTG PMTLSLTAIG EVAAGQMIRR GGARPGDDIY VTGTVGDAAL
GLSVLRGALD MPDTADAAHL VRRYREPEPR TAFGPKLCGV AHAALDVSDG LMADLGHICE
VSGTGARINM ESVPLSRAAR AALARDPRLV EAVAGGGDDY EILFAAPPDR ASKIGAIAAE
SGISATRIGT MTEQSDGVSA IDGAGNKIAL KQLGYRHF
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