Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2914 |
Symbol | |
ID | 5456805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3114459 |
End bp | 3114974 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640878496 |
Product | NusB antitermination factor |
Protein accession | YP_001414178 |
Protein GI | 154253354 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00764902 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00305914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACTTCAG TTCCGACGCA ACAGACGGCG ACGAGAGGGC TCGATCCGCG AGCGCGCGCT GCTGCGCGAC TTTTCGCCGT CCAGGCGCTT TATCAGATGG ATATAGCGGC GACGCCACTC GACGAGGTGG TTGAAGAGTT TGTCGAGCAT CGGCTTGAAG AGCCGGAGGG CGACAATGAA ATATTTGCGG CCGATAAGGT GCACTTCGAG GATGTCGTTC GGGGTGTGGT GCGGGAGCAA AGAGAGCTCG ACGTTCAGGT GAATTCTGCG CTGGCCAAAG GCTGGTCGCT GGCTCGACTG GACGCAACCC TGCGTGCGAT CCTGCGTTGC GGAACATATG AACTTCGGCG ATGCAAGGAT GTGCCGCTCA AGGTCGTCAT CAATGAATAT GTCGAAATCG CACATGCCTT CTTCGAAGGC GACGAGCCTG GCGTGGTGAA TGCCGTTCTC GACCGGCTTG GCCGCGACAT TCGGGCCGGT TCCGGGATAG GTCATGGCAG CTCGGAGCAA GCCTGA
|
Protein sequence | MTSVPTQQTA TRGLDPRARA AARLFAVQAL YQMDIAATPL DEVVEEFVEH RLEEPEGDNE IFAADKVHFE DVVRGVVREQ RELDVQVNSA LAKGWSLARL DATLRAILRC GTYELRRCKD VPLKVVINEY VEIAHAFFEG DEPGVVNAVL DRLGRDIRAG SGIGHGSSEQ A
|
| |