Gene Plav_2914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2914 
Symbol 
ID5456805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3114459 
End bp3114974 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID640878496 
ProductNusB antitermination factor 
Protein accessionYP_001414178 
Protein GI154253354 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00764902 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.00305914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTCAG TTCCGACGCA ACAGACGGCG ACGAGAGGGC TCGATCCGCG AGCGCGCGCT 
GCTGCGCGAC TTTTCGCCGT CCAGGCGCTT TATCAGATGG ATATAGCGGC GACGCCACTC
GACGAGGTGG TTGAAGAGTT TGTCGAGCAT CGGCTTGAAG AGCCGGAGGG CGACAATGAA
ATATTTGCGG CCGATAAGGT GCACTTCGAG GATGTCGTTC GGGGTGTGGT GCGGGAGCAA
AGAGAGCTCG ACGTTCAGGT GAATTCTGCG CTGGCCAAAG GCTGGTCGCT GGCTCGACTG
GACGCAACCC TGCGTGCGAT CCTGCGTTGC GGAACATATG AACTTCGGCG ATGCAAGGAT
GTGCCGCTCA AGGTCGTCAT CAATGAATAT GTCGAAATCG CACATGCCTT CTTCGAAGGC
GACGAGCCTG GCGTGGTGAA TGCCGTTCTC GACCGGCTTG GCCGCGACAT TCGGGCCGGT
TCCGGGATAG GTCATGGCAG CTCGGAGCAA GCCTGA
 
Protein sequence
MTSVPTQQTA TRGLDPRARA AARLFAVQAL YQMDIAATPL DEVVEEFVEH RLEEPEGDNE 
IFAADKVHFE DVVRGVVREQ RELDVQVNSA LAKGWSLARL DATLRAILRC GTYELRRCKD
VPLKVVINEY VEIAHAFFEG DEPGVVNAVL DRLGRDIRAG SGIGHGSSEQ A