| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2913 |
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| Symbol | |
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| ID | 5456711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3113980 |
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| End bp | 3114435 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878495 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_001414177 |
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| Protein GI | 154253353 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.019233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00296498 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGACGACCC AGGCCCATAT TCTCATTGTC GAAGCACGTT TTTATGAAGA CCTGGCAGAT
GAACTCGCTC GTGGAGCGAT CCAGGCACTT GAGGCGCGCG GCGCCACATG GCAGAGAGCT
TCCGTGCCGG GCGTGCTCGA ACTTCCGGCC GCAGTGAAAT ATGCTCTCGA CGCGATGGCG
CATGGCGGAT TTACGAAAGC GTTTGACGGT TTCGTTGTTC TTGGATGCGT TATCCGCGGA
GAGACTACGC ATTACGACAT AGTGTCGAAT GAGTCAGCGC GAGCGTTGAT GGATCTTGGA
GTCGAACGCT CCCTTGCACT CGGAAACGGT ATACAGACGG TAGAGAATGA GGCGCAGGCG
TGGGCCCGCG CCAAGGTTAG CGAGAAGAAC AAAGGCGGCG GTGCCGCGAA TGCGTGTCTC
GATATGATCG AACTCAAGCG CAGCTTCGGC GGCTAG
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| Protein sequence | MTTQAHILIV EARFYEDLAD ELARGAIQAL EARGATWQRA SVPGVLELPA AVKYALDAMA
HGGFTKAFDG FVVLGCVIRG ETTHYDIVSN ESARALMDLG VERSLALGNG IQTVENEAQA
WARAKVSEKN KGGGAANACL DMIELKRSFG G
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