| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2908 |
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| Symbol | glyA |
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| ID | 5454492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3109174 |
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| End bp | 3110490 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878490 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | YP_001414172 |
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| Protein GI | 154253348 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000280655 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.00545149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTGA GCGATGCCGT GTCCCAGCGG AGCAGTTTTA CCGGGTTTTT TACCGATGGA
TTGGCGGCAA GCGATCCTGA CGTCCTGAGG GCCATCGAGC TGGAACTCGA GCGCCAGCAG
ACCGAGATTG AGTTGATCGC CTCGGAAAAC ATCGTCTCCC GCGCCGTTCT CGAGGCGCAG
GGATCGATCA TGACCAACAA ATATGCGGAA GGGTATCCCG GCAAGCGCTA CTACGGCGGC
TGCGAGTTTG TCGATATAGC CGAAGAGCTG GCAATTGATC GCGCCAAAAA ACTGTTCGAT
TGCACCTATG CCAATGTGCA GCCCAATTCC GGTTCGCAAG CCAACCAGGG CGTGATGATG
GCGTTGCTGA AGCCGGGCGA CACCATTATG GGCATGAGCC TTGCGGCCGG CGGTCACCTG
ACGCATGGCG CGGCACCCAA CCAGTCCGGA AAATGGTTCA ATGCCGTTCA ATATGGCGTT
CGCAGCCAGG ACCACCTGAT CGATATGGAT GAGGTGGCCA GCCTGGCGAA GCAGCACAAG
CCGAAGATGA TCATCGCGGG CGGCTCGGCT TATCCACGTG TCATCGATTT CAAGGCATTT
CGCGAAATCG CCGACAGTGT TGGCGCGCTC TTCATGGTGG ACATGGCGCA TTTTGCCGGC
CTCGTCGCGG GCGGCATGCA TCCGAGCCCG CTTCCTTATG CAGACGTCGT TACGACGACG
ACTCACAAGA CGCTGCGCGG GCCGCGGGGC GGCATGATCC TCTCGAACAA CGAGGACATC
GGCAAGAAGG TCAACTCGGC GATCTTCCCC GGCATTCAAG GCGGACCGCT GATGCATGTC
ATCGCGGGCA AGGCCGTTGC CTTTGGCGAG GCACTCCGGC CAGAGTTCAA GGCCTATGCA
AAATCGGTCG TGGACAACGC GCGGACGCTT GCGGCGACAC TTGCCGAGGC TGGACTTGCG
ATCGTTTCAG GCGGCACGGA TACGCATCTG ATGCTTGTCG ATCTCAGACC CAAGAAGCTG
ACAGGCAAGA CGGCGGAAGC CGCACTCGAG CGCGCACACA TAACCTGCAA CAAGAATGGT
ATTCCATTCG ATCCGGAGAA GCCGACGATC ACTTCCGGCG TTCGCCTTGG CACGCCGGCG
GGAACGACGC GCGGCTTCGG TGTAGCGGAA TTTGCCGAGA TCGGGCGACT GATTACGGAA
GTTCTGGACG GACTGGCGCA GAACGGCGAT GACAAGAACG GCGATGTCGA GGCGAGTGTG
CGCTCTCGCG TCATCGAGTT GTGCAGGCGT TTTCCGATTT ATGGCGGGCC GAAGTAA
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| Protein sequence | MALSDAVSQR SSFTGFFTDG LAASDPDVLR AIELELERQQ TEIELIASEN IVSRAVLEAQ
GSIMTNKYAE GYPGKRYYGG CEFVDIAEEL AIDRAKKLFD CTYANVQPNS GSQANQGVMM
ALLKPGDTIM GMSLAAGGHL THGAAPNQSG KWFNAVQYGV RSQDHLIDMD EVASLAKQHK
PKMIIAGGSA YPRVIDFKAF REIADSVGAL FMVDMAHFAG LVAGGMHPSP LPYADVVTTT
THKTLRGPRG GMILSNNEDI GKKVNSAIFP GIQGGPLMHV IAGKAVAFGE ALRPEFKAYA
KSVVDNARTL AATLAEAGLA IVSGGTDTHL MLVDLRPKKL TGKTAEAALE RAHITCNKNG
IPFDPEKPTI TSGVRLGTPA GTTRGFGVAE FAEIGRLITE VLDGLAQNGD DKNGDVEASV
RSRVIELCRR FPIYGGPK
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