| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2903 |
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| Symbol | |
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| ID | 5453593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3104534 |
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| End bp | 3105733 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878485 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001414167 |
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| Protein GI | 154253343 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0000818135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGAGA TCGCGAGGAA TTACGGGCAG GACCAGACCC ATTGGGTGGA CCCCTGGCAG
GCGGAGACGG GCGCGGCTGT TGCGGAAGCG CCGCCCTTCG AGCGGTCGTC AGCGCCGGTT
CTCAGCGCCG AGACGCTGTT GCCGCTTACG CACGCAATCG AGACTTATCG CGTAATCGCC
AATCTCGGCG GCTGGGGCTA TGTGGCCTCC GGCGAACGGC TGGAGCTCGG TGTGCGCGAC
CCGCGCGTCG TGCAGGTGCG CGAACGGTTG ACGGCGACCG GCGACCTGAC CGTTCCGGCG
CAGGACGCCG AGCTTTATGA CGCCAATGTT TATGAAGCGG TGCGCCGGTA TCAGGTGCGC
AACGGGCTTG AGCCCGATGG TATCGTCGGG AGGCGCACCA TTGCGGCGAT GAATGTTCGC
GTTCAGACGC GTATTCGGCA ACTGGAACTC AATCTACGCC GGCTTTCGGC GGCGGTTCCC
GCGCTGCCCG ACCGGTACGT GTTTGTGAAT ATTGCGGGGC AGGAAGTTGA AGCGGTGAAC
AACGGGATTG TGGAGTTCCG CGAGCCCGTC ATCGTCGGCA AGCAGGACCG GCAAACGCCG
GAAATCACCA GTGAAGTAAA CTCGATCACG TTCAATCCTT ACTGGTATGT CCCGAAATCC
ATCGCGATGG CCGATATGCT GCCGAAGATC CGGGCCAATC CCGACTATCT GCAACGGCAG
GGCATTCGCG TGCTGCAGGG ATGGGACACA AATATCCGTG AATTGAACCC GCGCAATATC
GACTGGTCGA ACCCGCGCAT CAATGAAGCT TATTACTTCA GGCAGGACCC CGGGCCGGGC
AATTCGCTCG GTTCTCTCAA GATCAATTTT CCCAACAACC AGGCGATCTT TCTTCATGAC
ACGCCGACCA AGACCCTGTT CGGAAGGCAG GAACGCAACT TCAGTTCGGG TTGCGTCCGT
GTGCAGAATG TTCGCGGGCT TGTGAGCTGG CTGATGCAGG GAGATAGCTC CGAATGGGAT
GCGGCACGGG TAGCGCGATC GGTGGATTCC CGGCAGTACA GAAATGTGTC GCTGGCGACG
CCGGTGCCGA TTTACCTCAT GTATCTGACC GCGTGGGTGA CGCCGGAGGG GATCGTTAAC
TTCCGGGATG ACGTGTATGA TCGCGATGGC AGCGTGAATA CGAGCGCGCT GGAAAACTAA
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| Protein sequence | MAEIARNYGQ DQTHWVDPWQ AETGAAVAEA PPFERSSAPV LSAETLLPLT HAIETYRVIA
NLGGWGYVAS GERLELGVRD PRVVQVRERL TATGDLTVPA QDAELYDANV YEAVRRYQVR
NGLEPDGIVG RRTIAAMNVR VQTRIRQLEL NLRRLSAAVP ALPDRYVFVN IAGQEVEAVN
NGIVEFREPV IVGKQDRQTP EITSEVNSIT FNPYWYVPKS IAMADMLPKI RANPDYLQRQ
GIRVLQGWDT NIRELNPRNI DWSNPRINEA YYFRQDPGPG NSLGSLKINF PNNQAIFLHD
TPTKTLFGRQ ERNFSSGCVR VQNVRGLVSW LMQGDSSEWD AARVARSVDS RQYRNVSLAT
PVPIYLMYLT AWVTPEGIVN FRDDVYDRDG SVNTSALEN
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