Gene Plav_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2902 
Symbol 
ID5453667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3103465 
End bp3104259 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID640878484 
Producthypothetical protein 
Protein accessionYP_001414166 
Protein GI154253342 
COG category[S] Function unknown 
COG ID[COG3752] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000104878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGGTG AAATTGCAAC TCTCATGCTC AATGCCGGCT TCGTGCTGGC GGCCATGCTC 
GTGGTCTGGG TGCTCAGCGT CATCCTGCGT GACGCAGGAA TTGTCGATAT CTTCTGGGGC
CTCGGATTCG TCATCATCGC CCTCGCCACC TGGAGCCTCA ATCCCGGCTA CTCCACCCGC
GCCGCGCTGA TTGCCGGCCT CACCGCGCTC TGGGGTCTGC GTCTTGCCGG CCACCTCTAT
CTCCGCTGGC GCCGGGAGGC GAGCGAGGAC CGCCGCTATG CCGCCATGCG CGCGAAACGC
GGCCCCTCCT TCTGGTGGAA AAGCCTCTAT ATCGTCTTCG GCCTGCAGGC GGCGATCATG
TTTGCCGTCT CGCTGCCGGT ACAGTTCGGC ATCATGGCCG AAACACCCGG CCGCCTCACA
CTCGCGGATG TGCTCGGCAC TGTTCTTGTC CTCACGGGCC TTGCCTTCGA AGCGATCGGC
GACGCTCAGC TCACCGCTTT CAAGGCCGAT CCGGCCAATC GCGGCAAGGT GATGGATCGC
GGTCTCTGGG CATGGACCCG TCATCCGAAT TATTTTGGCG ACGCCGTTGT CTGGTGGGGC
CTGTTCATCA TCGCCGCATC CTCGCCCGCC TTGTGGTGGA CGGCCATCGG CCCCGCCCTG
ATGACATGGT TTCTTGTAAA CGTCTCAGGC AAGGCGCTTC TCGAGCGTGG CCTCCGCAAA
TCGCGCCCCG GCTACGACGA CTATGTCTGG CGCACAAGCG GGTTCATCCC CCTGCCGCCA
CGCCGCAGGG ACTGA
 
Protein sequence
MSGEIATLML NAGFVLAAML VVWVLSVILR DAGIVDIFWG LGFVIIALAT WSLNPGYSTR 
AALIAGLTAL WGLRLAGHLY LRWRREASED RRYAAMRAKR GPSFWWKSLY IVFGLQAAIM
FAVSLPVQFG IMAETPGRLT LADVLGTVLV LTGLAFEAIG DAQLTAFKAD PANRGKVMDR
GLWAWTRHPN YFGDAVVWWG LFIIAASSPA LWWTAIGPAL MTWFLVNVSG KALLERGLRK
SRPGYDDYVW RTSGFIPLPP RRRD