| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2900 |
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| Symbol | |
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| ID | 5455259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3101902 |
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| End bp | 3102792 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878482 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001414164 |
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| Protein GI | 154253340 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.287224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0000517661 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAGA TCGGATTTAT TGGACTCGGC AATATGGGCG GGCCGATGGC GAAGAACCTC
GCCAAGGCAG GACATGCGCT CAAGGTGTTC GATCTTGCGC CCGCGGCTGT TGCGGCGCTT
GTCGAAGCCG GTGCCACAAA AGCGGCGAGC GCGAGCGACG CGGCGAAGGA CGTCGAATTC
GTCGTAACGA TGCTGCCGGC GGGCGAGCAT GTGCGCTCGG TCTATTTGGG CGAAGGCGGC
CTCTTGTCGG TGGCGGCGAA GGGTACGGTT TTCATCGACA GCTCGACCAT CGACGTTCCC
TCTGCGCGGG AGACGATAGC GGCGGCGGAA AAGGCCGGCA TGATGATGAT CGACGCGCCT
GTGTCGGGCG GGGTAGGAGG AGCGGAAGCG GGCACGTTAA CCTTCATGGC AGGCGGCACC
GTGGATGCCT TCGAGAAGGC GAAGCCGCTG CTGGAGATCA TGGGCAAGAA TATCTTTCAC
GCAGGGGCGG CGGGAAACGG GCAGGTTGCC AAGGTCTGCA ACAACATGAT CCTCGGCATT
TCGATGATCG GCGTTTCGGA GGCCTTCGTG CTGGGAGAGA AGCTCGGGCT CGATGCGCAG
ACGCTTTTCG ATATTTCCTC GACGGCTTCC GGCCAGTGCT GGTCCATGAC TTCCTATTGC
CCGGTGCCCG GCCCCGTGCC TGCATCTCCC GCCAACCGGA ACTACAAGCC GGGATTTTCA
GCCGCGATGA TGCTCAAGGA CCTGCGCCTC GCACAGGATG CGTCCAAAAC GGCGAGAACG
CCGACACCTC TCGGGGCGCA GGCGGCGCAG CTTTACGCGC TCATGGAAGC GGCTGGGGAA
GAGAATCTGG ATTTTTCGGG GGTCATCAAG CTGATCCGCG GAGAAATATA G
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| Protein sequence | MAKIGFIGLG NMGGPMAKNL AKAGHALKVF DLAPAAVAAL VEAGATKAAS ASDAAKDVEF
VVTMLPAGEH VRSVYLGEGG LLSVAAKGTV FIDSSTIDVP SARETIAAAE KAGMMMIDAP
VSGGVGGAEA GTLTFMAGGT VDAFEKAKPL LEIMGKNIFH AGAAGNGQVA KVCNNMILGI
SMIGVSEAFV LGEKLGLDAQ TLFDISSTAS GQCWSMTSYC PVPGPVPASP ANRNYKPGFS
AAMMLKDLRL AQDASKTART PTPLGAQAAQ LYALMEAAGE ENLDFSGVIK LIRGEI
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