| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2899 |
|---|
| Symbol | |
|---|
| ID | 5455384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3100842 |
|---|
| End bp | 3101882 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640878481 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001414163 |
|---|
| Protein GI | 154253339 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.540353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0000619803 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG AACCTGAAGT CCTCTTCGAG CGGCGTGGGG CCGCGGGCAT CGTCACGCTC
AACCGGCCAA AGGCGCTCAA TGCGCTGACG CTCGGCATGG TGCGCGCGAT CCATCCGCAG
CTCGCGGCGT GGGCGGAGGA ACCCAATGTG CAATGCGTCG TCATCGAGGC GGCGGGCGAG
AAGGCGTTCT GCGCAGGCGG CGACATTCGC GCGCTCTACG ATTGGGGGCA GGCGGGAGAC
AGGACGGCGC TCGATTTCTG GCGCGAGGAA TATCAACTCA ATCGCTTCAT CAAGCATTAT
CCGAAGCCTT ATGTGGCGCT GATGGACGGG ATCAACATGG GTGGCGGCGT CGGCCTTTCC
GTGCATGGTT CACATCGCGT GGCGACCGAG AGGCTTACCT TTGCGATGCC TGAAACCGGC
ATTGGACTTT TCCCCGATGT GGGCGGTACT TATTTTCTGC CGCGCTGCCC CGGCGAAACG
GGACTTTTTC TCGGGCTTAC CGGTGCGAGG ATAAAGGCGG CGGATGCCGT TTATGCCGGC
ATTGCGGACG CCTATGTTCC GTCGGTGCGG CTTGAGACGC TGAAGGATCG CCTGGCCGGC
GGCGCGCCGG TACGCGAGGC GCTTGGCGAA GTTGCGGAAG AAGAGGGTGC GGCGCCGCTC
GCCGAACTGC GCGGGACGAT CGACCGGCAT TTCGGGAAGA ATTCCGTTGC CGAGATTCTC
GCTTCGCTTC GCGCGGATGG GGGCGAGTGG GAGACAAAGA CCGCGGATAC AATCGAAACC
AAATCGCCGA CAAGCACGCT TGTCGCTTTC CGGCAAATTC GCGAGGGCGC GGCGCTCGAC
TTCGATGCCT GCATGAAGCT GGAGTTCCGG CTCATCAACG GCTTTGTGAA AGGACACGAC
TTCTATGAAG GCGTGCGGGC AGTCGTGATC GACAAGGATC AAAATCCGAA ATGGAAGCCG
GAAACGCTTT CCGACATGAA TGTGGACGAT GTGGACGGAT ATTTCGAGCC GCTCGGTGCG
GATGAGCTGA CATTCGGCTA G
|
|---|
| Protein sequence | MSEEPEVLFE RRGAAGIVTL NRPKALNALT LGMVRAIHPQ LAAWAEEPNV QCVVIEAAGE
KAFCAGGDIR ALYDWGQAGD RTALDFWREE YQLNRFIKHY PKPYVALMDG INMGGGVGLS
VHGSHRVATE RLTFAMPETG IGLFPDVGGT YFLPRCPGET GLFLGLTGAR IKAADAVYAG
IADAYVPSVR LETLKDRLAG GAPVREALGE VAEEEGAAPL AELRGTIDRH FGKNSVAEIL
ASLRADGGEW ETKTADTIET KSPTSTLVAF RQIREGAALD FDACMKLEFR LINGFVKGHD
FYEGVRAVVI DKDQNPKWKP ETLSDMNVDD VDGYFEPLGA DELTFG
|
|---|
| |