Gene Plav_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2888 
Symbol 
ID5454861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3092104 
End bp3092622 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID640878470 
Productflavin reductase domain-containing protein 
Protein accessionYP_001414152 
Protein GI154253328 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.000413066 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAGCG GCGAAGAGAC GATAGAGCAG GGCGGCGCCC ACGATATTCG CAAGTTCCGT 
AATGCGCTTG GCTGGTTCGC GACCGGTGTT GCCGTCATCA CGACACGTGT GAAGGGCGGC
GAGCCCTTCG GCATTACCGT GAACTCGTTT TCATCGGTTT CGCTCGATCC GCCGCTCGTG
CTCTGGTGCC TCGACAAGAA GTCAGACACG CTGGCGGCGT TCGAGCAGGC GACGCATTTC
ACGGTCAATG TTTTGCGGGA GGAGCACCAG GACCTCTCCG CGCGGCTGGC ACGGAAAGGC
GATCACAGCC TTGCCGGCAT GGACGTGCGG GAAGGCGAAA GCGGCAGCCC CGCGCTTGCC
GAGGCGCTCG CCCATTTCGA ATGCGAAATC GAAGCGCGGC ACGATGCGGG CGACCATGTC
ATCATGGTGG GGCGTGTCGT GAAGTTCGAT TATGTGGAAG AAGGGCGGCC GCTGCTCTAT
CACCGCGGCG CCTATCAGAT GTTGCCGCCG GTCATATAA
 
Protein sequence
MASGEETIEQ GGAHDIRKFR NALGWFATGV AVITTRVKGG EPFGITVNSF SSVSLDPPLV 
LWCLDKKSDT LAAFEQATHF TVNVLREEHQ DLSARLARKG DHSLAGMDVR EGESGSPALA
EALAHFECEI EARHDAGDHV IMVGRVVKFD YVEEGRPLLY HRGAYQMLPP VI