| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2877 |
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| Symbol | |
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| ID | 5454083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3080176 |
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| End bp | 3082422 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878459 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001414141 |
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| Protein GI | 154253317 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0187639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0015107 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAAG TTGCACCGCC GCCGGAGCCG GAACACGAGA TCAATTTGCG GGAGGCGCTG
GAGGAGCGGT ATCTCGCTTA TGCGCTCTCG ACGATCATGC ATCGGGCGCT GCCGGATGTG
CGGGACGGGC TGAAGCCGGT GCATCGGCGC GTACTGTTCG CGATGCGGCA GCTGAAACTC
GATCCGGGGT CGGGGTTCAA GAAATCGGCG CGCGTGGTGG GCGATGTCAT CGGCCGCTAC
CATCCGCATG GCGACCAGTC GGTCTATGAC GCGCTGGTGC GGCTGGCGCA GAGTTTTTCG
GTGCGCTATC CGCTGGTCGA CGGGCAGGGC AATTTCGGCA ATGTGGACGG CGATAACGCG
GCGGCGATGC GCTACACCGA AGCGCGGCTG ACGGAAGTTG CGGCGCAGCT GCTGAACGGG
ATCGACGAGG ACACGGTCGA TTTTCGCGAC ACCTATGACG GCGAGGACAG CGAGCCGACG
GTGCTGCCCG GCGCCTTTCC GCAATTGCTG GCGAATGGCG CGGCGGGGAT CGCGGTCGGC
ATGGCGACCA GCATTCCGCC ACATAATGCG GCCGAGCTTT GCGACGCGGC GCTTTATCTC
ATCAAGCATC CGAATGCGAA GACGGAGAAG CTGGTCGAAT TCGTGAAGGG GCCGGACTTT
CCGACGGGCG GCATCATCGT GGAACCGAGG GCGGCGATGC TCGAGGCTTA CGAGACGGGG
CGCGGCGGCT TTCGCGTGAG GGCGCGGTGG GAGCAGGAAG AGCTGCCGCG CGGCGGCTAC
CAGATCGTCG TCACGGAAAT TCCCTATCAG GTGCAGAAGT CGAAGCTGGT GGAGAAGATC
GCCGAGCTGT TGCAGGCCCG CAAGCTGCCG CTGCTGGAAG ATGTGCGCGA CGAGAGCGCG
GAGGAAATCC GCCTCGTGCT GGTGCCGAAG GCGAGGACCG TCGATCCGGC GCATCTGATG
GAGTCGCTTT TCCGTTCGAC CGAGCTGGAG AACCGCTTTC CGCTCAACAT GAACGTGCTC
TCCGCCGGGC AGGTGCCGGG CGTGATGTCG CTACGCGGCG TGCTGCGGGC ATGGCTTGAG
CATCGCAAGG TTGTGCTGGT GCGGCGCTCG AACTTCCGGC TCGACAAGAT CGAGAAGCGG
CTCGAAGTGC TGGAAGGCTA TCTCAAGGCC TATCTCAATC TCGACGAGGT GATCCGCATC
ATCCGGCAGG AGGATGAGCC GAAGCCGGCG CTCATCAAGA AGTTCAAGCT CACTGACAAC
CAGGCGGAAG CCATTCTCAA CATGCGGCTG CGATCTTTAC GCAAGCTGGA GGAGATGGAA
ATTCGCGGCG AGCACAAGGA ACTGTCGGCG GAGCAGAAGG CGCTGAAGTC GCTCGTCAAA
TCCGAGGACA AGCAATGGGC GCGTGTCGCG GACGAGATCA AGGAAGTGAA GGCGCTGTTC
GGACCGAAGA CGGCGCTCGG CGCGCGGCGG ACGAAATTCT CCGATGCGCC GGCGATCGAA
TATGTGCCGA TGGAAGCGAT GATCGAGAAG GAGCCGGTGA CGGTCGTCTG CTCCAAGAAG
GGCTGGATCC GCACGATGAA GGGGCATGTC GGGCCTGATA CGGAGATCAA GTTCAAAGAA
GGCGATGCGG GACGCTTCCT GCTTCACGCG GAAACGACCG ACAAGGTTTT GCTGTTTGCG
ACGGATGGGC GCTTCTACAC ACTCGACGTG ACCAAGCTGC CGGGCGGGCG CGGCAATGGC
GAGCCGGTGC GGCTGATGAT CGACCTCGAC GAGAGCCACG AGGTGGTGGA GCTCTTCGTA
CACCAGCCGG GGCGGAAGCT CATCGTCGCG TCGCATGAAG GCAATGGCTT CATCGTGCCG
GAAGACGAGG TGGTGGCGAT GCGCCGGGCG GGCAAGCAGG TGCTGAACGT GACCGGCAAG
GACGAGGCGA TTGCCTGCGC GCCGGTGCAG GGAACGCATG TGGCGGTGAT CGGCGACAAC
CGGAAGCTGC TGATCTTCCC GGTGAAAGAG GTGAACGAGA TGACGCGCGG CAAGGGCGTG
CGGCTGCAAC GCTATGCCGA TGGCGGGCTC GCGGATGTGA AGACCTTCAA CCTGAAAGAG
GGGCTGACTG TTTACGACAA GAGCGGCAGG CAGCGGAACT TCCCGGACCT CAAGGACTGG
GTGGGCGCGC GGGCGCAGGC CGGACGCTTG CCGCCCAAGG GCTTCACGAG CGAGCGGAAG
TTCGGGGGGC CGTTCGGGGC GGTGTGA
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| Protein sequence | MTKVAPPPEP EHEINLREAL EERYLAYALS TIMHRALPDV RDGLKPVHRR VLFAMRQLKL
DPGSGFKKSA RVVGDVIGRY HPHGDQSVYD ALVRLAQSFS VRYPLVDGQG NFGNVDGDNA
AAMRYTEARL TEVAAQLLNG IDEDTVDFRD TYDGEDSEPT VLPGAFPQLL ANGAAGIAVG
MATSIPPHNA AELCDAALYL IKHPNAKTEK LVEFVKGPDF PTGGIIVEPR AAMLEAYETG
RGGFRVRARW EQEELPRGGY QIVVTEIPYQ VQKSKLVEKI AELLQARKLP LLEDVRDESA
EEIRLVLVPK ARTVDPAHLM ESLFRSTELE NRFPLNMNVL SAGQVPGVMS LRGVLRAWLE
HRKVVLVRRS NFRLDKIEKR LEVLEGYLKA YLNLDEVIRI IRQEDEPKPA LIKKFKLTDN
QAEAILNMRL RSLRKLEEME IRGEHKELSA EQKALKSLVK SEDKQWARVA DEIKEVKALF
GPKTALGARR TKFSDAPAIE YVPMEAMIEK EPVTVVCSKK GWIRTMKGHV GPDTEIKFKE
GDAGRFLLHA ETTDKVLLFA TDGRFYTLDV TKLPGGRGNG EPVRLMIDLD ESHEVVELFV
HQPGRKLIVA SHEGNGFIVP EDEVVAMRRA GKQVLNVTGK DEAIACAPVQ GTHVAVIGDN
RKLLIFPVKE VNEMTRGKGV RLQRYADGGL ADVKTFNLKE GLTVYDKSGR QRNFPDLKDW
VGARAQAGRL PPKGFTSERK FGGPFGAV
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